RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 FAM228BP0C875 321 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 CYP11B2P19099 503 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 KLRC1P26715 233 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 POLD1P28340 1107 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 LRRC63Q05C16 580 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 PDIA5Q14554 519 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 ARSHQ5FYA8 562 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 GJB7Q6PEY0 223 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 LEKR1Q6ZMV7 388 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 C15orf52Q6ZUT6 534 aaKnown RBP14.87□□□□□ -0.03
CLK3-215ENST00000564353 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
CLK3-215ENST00000564353 RSPH14Q9UHP6 348 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 MYBP10242 640 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 NR2F2P24468 414 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 CLK2P49760 499 aaKnown RBP14.87□□□□□ -0.03
CLK3-215ENST00000564353 JAG1P78504 1218 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 SFMBT2Q5VUG0 894 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 PIGOQ8TEQ8 1089 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 TLR10Q9BXR5 811 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 RGL1Q9NZL6 768 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 SCAF8Q9UPN6 1271 aaKnown RBP14.87□□□□□ -0.03
CLK3-215ENST00000564353 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
CLK3-215ENST00000564353 LOC102724159A0A0B4J2E5 919 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 ACTN2P35609 894 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 CRKP46108 304 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 PWP2Q15269 919 aaKnown RBP14.86□□□□□ -0.03
CLK3-215ENST00000564353 ZYXQ15942 572 aaKnown RBP14.86□□□□□ -0.03
CLK3-215ENST00000564353 KLHDC7AQ5VTJ3 777 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 CATSPER3Q86XQ3 398 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 ALS2CR12Q96Q35 445 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 NHSQ6T4R5 1651 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 FAM86B1E9PN63 330 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 AGPSO00116 658 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 RGL2O15211 777 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 FAM86B2P0C5J1 330 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 GUCY2FP51841 1108 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 KIAA0753Q2KHM9 967 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 CERKLQ49MI3 558 aaPredicted RBP14.86□□□□□ -0.03
CLK3-215ENST00000564353 KCTD16Q68DU8 428 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 SFR1Q86XK3 245 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 FAM71BQ8TC56 605 aa14.86□□□□□ -0.03
CLK3-215ENST00000564353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLK3-215ENST00000564353 COL24A1Q17RW2 1714 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 MYH10P35580 1976 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 NOVP48745 357 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 ZCWPW2Q504Y3 356 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 FIGNQ5HY92 759 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 TSEN2Q8NCE0 465 aaKnown RBP14.85□□□□□ -0.03
CLK3-215ENST00000564353 TSGA10Q9BZW7 698 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 FGFR1OPO95684 399 aaKnown RBP14.85□□□□□ -0.03
CLK3-215ENST00000564353 CASP4P49662 377 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 KLHL30Q0D2K2 578 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 KCNH2Q12809 1159 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 SLC9C1Q4G0N8 1177 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 KRT27Q7Z3Y8 459 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 HOMEZQ8IX15 550 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 KLHL7Q8IXQ5 586 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 CCDC65Q8IXS2 484 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 COA1Q9GZY4 146 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 MYH1P12882 1939 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 PCNTO95613 3336 aa14.85□□□□□ -0.03
CLK3-215ENST00000564353 ANO9A1A5B4 782 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 GOLGA6BA6NDN3 693 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 MEIS2O14770 477 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 ARHGAP4P98171 946 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 PLS1Q14651 629 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 SH3BP5LQ7L8J4 393 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 GOLGA6L1Q8N7Z2 621 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 NOX5Q96PH1 765 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 REEP2Q9BRK0 252 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 BHMT2Q9H2M3 363 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 ATP6V0A2Q9Y487 856 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 HYOU1Q9Y4L1 999 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 PCDHB13Q9Y5F0 798 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 TAF1LQ8IZX4 1826 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 ZC3H4Q9UPT8 1303 aaKnown RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 TMCO5BA8MYB1 307 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 GLI1P08151 1106 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 SMARCA1P28370 1054 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 ICA1Q05084 483 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 CTTNQ14247 550 aaKnown RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 MAP9Q49MG5 647 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 SIAH1Q8IUQ4 282 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 AFAP1L1Q8TED9 768 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 TDRD3Q9H7E2 651 aaKnown RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 PKD2L1Q9P0L9 805 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 AJAP1Q9UKB5 411 aaPredicted RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 FAM153BP0C7A2 387 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 HNRNPH3P31942 346 aaKnown RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 NOP2P46087 812 aaKnown RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 ASTE1Q2TB18 679 aaPredicted RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 FAM153CQ494X1 144 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 GPATCH4Q5T3I0 446 aaKnown RBP14.84□□□□□ -0.03
CLK3-215ENST00000564353 HAUS3Q68CZ6 603 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 C8orf74Q6P047 294 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 MAEAQ7L5Y9 396 aa14.84□□□□□ -0.03
CLK3-215ENST00000564353 SH2D3CQ8N5H7 860 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms