RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 EMSYQ7Z589 1322 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 SMIM10L2AP0DMW4 78 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 SMIM10L2BP0DMW5 78 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 ACTN1P12814 892 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 C16orf59Q7L2K0 433 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 TRIM50Q86XT4 487 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 BLIDQ8IZY5 108 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 RASGRP4Q8TDF6 673 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 HERVK_113Q902F9 699 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 GLG1Q92896 1179 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 TNPO1Q92973 898 aaKnown RBP22.58■■□□□ 1.21
CMTM3-207ENST00000564060 ATP6V0A1Q93050 837 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 GTF3C6Q969F1 213 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 AZI2Q9H6S1 392 aa22.58■■□□□ 1.21
CMTM3-207ENST00000564060 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.57■■□□□ 1.2
CMTM3-207ENST00000564060 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.57■■□□□ 1.2
CMTM3-207ENST00000564060 GSTTP1A0A1W2PQM5 241 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 FAM86B1E9PN63 330 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 FAM86B2P0C5J1 330 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 SELPP16109 830 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 HOXC8P31273 242 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 CIITAP33076 1130 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 USP11P51784 963 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 ME3Q16798 604 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 LRRC8DQ7L1W4 858 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 CTAGE1Q96RT6 745 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 UPF2Q9HAU5 1272 aaKnown RBP22.57■■□□□ 1.2
CMTM3-207ENST00000564060 GBF1Q92538 1859 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 NRCAMQ92823 1304 aa22.57■■□□□ 1.2
CMTM3-207ENST00000564060 IGLV3-22A0A075B6J6 115 aa22.56■■□□□ 1.2
CMTM3-207ENST00000564060 IPO5O00410 1097 aaKnown RBP22.56■■□□□ 1.2
CMTM3-207ENST00000564060 RASIP1Q5U651 963 aa22.56■■□□□ 1.2
CMTM3-207ENST00000564060 FAM109BQ6ICB4 259 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-207ENST00000564060 SERINC5Q86VE9 423 aa22.56■■□□□ 1.2
CMTM3-207ENST00000564060 RNPEPQ9H4A4 650 aa22.56■■□□□ 1.2
CMTM3-207ENST00000564060 TBC1D22BQ9NU19 505 aa22.56■■□□□ 1.2
CMTM3-207ENST00000564060 ORC3Q9UBD5 711 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-207ENST00000564060 CKBP12277 381 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 ACTR2P61160 394 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 ITGB3BPQ13352 177 aaPredicted RBP22.55■■□□□ 1.2
CMTM3-207ENST00000564060 ZNF697Q5TEC3 545 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 DEFB128Q7Z7B8 93 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 DHX38Q92620 1227 aaKnown RBP22.55■■□□□ 1.2
CMTM3-207ENST00000564060 ZNF577Q9BSK1 485 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 TELO2Q9Y4R8 837 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 TET1Q8NFU7 2136 aa22.55■■□□□ 1.2
CMTM3-207ENST00000564060 ADAMTS3O15072 1205 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 CAND2O75155 1236 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 LGR5O75473 907 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 SLC26A2P50443 739 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 PRR16Q569H4 304 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 OTOP2Q7RTS6 562 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 KRT25Q7Z3Z0 450 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 DEFB123Q8N688 67 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 TBCKQ8TEA7 893 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 AIFM3Q96NN9 605 aa22.54■■□□□ 1.2
CMTM3-207ENST00000564060 SZT2Q5T011 3432 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 TMEM265A0A087WTH1 108 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 ZNF200P98182 395 aaPredicted RBP22.53■■□□□ 1.2
CMTM3-207ENST00000564060 FAM160B1Q5W0V3 765 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 PLPPR4Q7Z2D5 763 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 NECAB1Q8N987 351 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 IL27Q8NEV9 243 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 PHF20Q9BVI0 1012 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 FTOQ9C0B1 505 aaKnown RBP eCLIP22.53■■□□□ 1.2
CMTM3-207ENST00000564060 BRMS1Q9HCU9 246 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 SETD4Q9NVD3 440 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 LIMCH1Q9UPQ0 1083 aa22.53■■□□□ 1.2
CMTM3-207ENST00000564060 M0R2N6 131 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 DDX39AO00148 427 aaKnown RBP22.52■■□□□ 1.2
CMTM3-207ENST00000564060 TREHO43280 583 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 ATG7O95352 703 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 CTDNEP1O95476 244 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 RPLP2P05387 115 aaKnown RBP22.52■■□□□ 1.2
CMTM3-207ENST00000564060 MARK3P27448 753 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 RBM25P49756 843 aaKnown RBP22.52■■□□□ 1.2
CMTM3-207ENST00000564060 STAT5BP51692 787 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 KRT76Q01546 638 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 PPFIA1Q13136 1202 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 NONOQ15233 471 aaKnown RBP eCLIP22.52■■□□□ 1.2
CMTM3-207ENST00000564060 ZNF746Q6NUN9 644 aaPredicted RBP22.52■■□□□ 1.2
CMTM3-207ENST00000564060 SMAP1Q8IYB5 467 aaPredicted RBP22.52■■□□□ 1.2
CMTM3-207ENST00000564060 LMBR1Q8WVP7 490 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 SLC4A7Q9Y6M7 1214 aa22.52■■□□□ 1.2
CMTM3-207ENST00000564060 CCDC194A0A1B0GVG4 234 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 RRN3P2A6NIE6 340 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 ZBBXA8MT70 800 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 BAIAP3O94812 1187 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 LARGE1O95461 756 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 THPOP40225 353 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 ADAM17P78536 824 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 HIC1Q14526 733 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 NPY5RQ15761 445 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 TRIM71Q2Q1W2 868 aaKnown RBP22.51■■□□□ 1.19
CMTM3-207ENST00000564060 MIS18BP1Q6P0N0 1132 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 TAF2Q6P1X5 1199 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 MOXD1Q6UVY6 613 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 NSUN7Q8NE18 718 aaKnown RBP22.51■■□□□ 1.19
CMTM3-207ENST00000564060 KCNJ14Q9UNX9 436 aa22.51■■□□□ 1.19
CMTM3-207ENST00000564060 BACH1O14867 736 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms