RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 CHRNA5P30532 468 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 GFRA1P56159 465 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 TGFB2P61812 414 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 SCRN1Q12765 414 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 PRSS36Q5K4E3 855 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 CREG2Q8IUH2 290 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 TMEM145Q8NBT3 493 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 RAPGEF4Q8WZA2 1011 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 COG3Q96JB2 828 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 HRASLS5Q96KN8 279 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 FCRL3Q96P31 734 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 MCMBPQ9BTE3 642 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 SLC12A9Q9BXP2 914 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 FOXP3Q9BZS1 431 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 ATP13A1Q9HD20 1204 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 TERF2IPQ9NYB0 399 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 TCFL5Q9UL49 500 aa7.88□□□□□ -1.15
HERPUD1-208ENST00000563911 BRCA1P38398 1863 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 CGNL1Q0VF96 1302 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 PITPNM2Q9BZ72 1349 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 PCDH11XQ9BZA7 1347 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 PCDH11YQ9BZA8 1340 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 AURKAO14965 403 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 FKTNO75072 461 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 GSTM1P09488 218 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 HSPA1AP0DMV8 641 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 HSPA1BP0DMV9 641 aaKnown RBP7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 IFNGR1P15260 489 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 DDR1Q08345 913 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 FSTL1Q12841 308 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 AOC3Q16853 763 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 PRSS53Q2L4Q9 553 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 GAB4Q2WGN9 574 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 TMPRSS7Q7RTY8 843 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 ASB11Q8WXH4 323 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 RNF112Q9ULX5 631 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 BACE2Q9Y5Z0 518 aa7.87□□□□□ -1.15
HERPUD1-208ENST00000563911 NCAPD2Q15021 1401 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 INSRP06213 1382 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 KDRP35968 1356 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 DNAJC25-GNG10A0A024R161 153 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 BLACEA4D250 179 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 ZNF205O95201 554 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 GRIK1P39086 918 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 SEPHS1P49903 392 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 MAP4K2Q12851 820 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 RNF111Q6ZNA4 994 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 CDADC1Q9BWV3 514 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 CARD11Q9BXL7 1154 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 NCOA5Q9HCD5 579 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 GPRC5CQ9NQ84 441 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 SRP68Q9UHB9 627 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 PCDHA11Q9Y5I1 949 aa7.86□□□□□ -1.15
HERPUD1-208ENST00000563911 RTL1A6NKG5 1358 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 ST20-MTHFSA0A0A6YYL1 179 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 PLD2O14939 933 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 SCG5P05408 212 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 TMF1P82094 1093 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 PRKCQQ04759 706 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 EGR3Q06889 387 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 PUS7Q96PZ0 661 aaKnown RBP7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 RNF181Q9P0P0 153 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 VAV3Q9UKW4 847 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 PKD1L3Q7Z443 1732 aa7.85□□□□□ -1.15
HERPUD1-208ENST00000563911 C4AP0C0L4 1744 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 THBDP07204 575 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 PHKG2P15735 406 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 RPL10P27635 214 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 PABPC4Q13310 644 aaKnown RBP eCLIP7.84□□□□□ -1.156e-14■■■□□ 18
HERPUD1-208ENST00000563911 FNDC3BQ53EP0 1204 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 DALRD3Q5D0E6 543 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 SLC35F1Q5T1Q4 408 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 USP53Q70EK8 1073 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 KSR1Q8IVT5 923 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 COPS5Q92905 334 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 MRPL4Q9BYD3 311 aaKnown RBP7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 PLAAQ9Y263 795 aa7.84□□□□□ -1.15
HERPUD1-208ENST00000563911 SBF1O95248 1867 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 MYH14Q7Z406 1995 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 ESR1P03372 595 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 TM4SF1P30408 202 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 CYP4F3Q08477 520 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 IKZF1Q13422 519 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 RTP2Q5QGT7 225 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 INTS5Q6P9B9 1019 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 FILIP1Q7Z7B0 1213 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 PPIL6Q8IXY8 311 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 DHX37Q8IY37 1157 aaKnown RBP7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 MISP3Q96FF7 219 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 CLUHP3Q96NS8 147 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 BSDC1Q9NW68 430 aaPredicted RBP7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 TMOD3Q9NYL9 352 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 NDOR1Q9UHB4 597 aa7.83□□□□□ -1.16
HERPUD1-208ENST00000563911 PRKAB1Q9Y478 270 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms