RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 SCG2P13521 617 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 ZNF76P36508 570 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 WDR5P61964 334 aaKnown RBP17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 ARHGAP4P98171 946 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 ADGRE1Q14246 886 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 CCDC85BQ15834 202 aaPredicted RBP17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 CNKSR3Q6P9H4 555 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 USP38Q8NB14 1042 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 PHOSPHO2Q8TCD6 241 aa17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 NCOA5Q9HCD5 579 aaKnown RBP17.43■□□□□ 0.38
LPCAT4-204ENST00000563240 KIF28PB7ZC32 967 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 hCG_1984214I3L0E3 225 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 RFXAPO00287 272 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 MAFGO15525 162 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 CXCL10P02778 98 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 GNAT1P11488 350 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 DEFB103AP81534 67 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 AKAP17AQ02040 695 aaKnown RBP17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 FAM117BQ6P1L5 589 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 RUFY3Q7L099 469 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 ZNF713Q8N859 430 aaPredicted RBP17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 LMBR1Q8WVP7 490 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 ZBED2Q9BTP6 218 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 JPH1Q9HDC5 661 aaPredicted RBP17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 PPP4R2Q9NY27 417 aa17.42■□□□□ 0.38
LPCAT4-204ENST00000563240 DOCK5Q9H7D0 1870 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 TET1Q8NFU7 2136 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 DDX39AO00148 427 aaKnown RBP17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 PRPF3O43395 683 aaKnown RBP17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 TLL1O43897 1013 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 LGR5O75473 907 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 ARHGEF15O94989 841 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 PDIA3P30101 505 aaKnown RBP17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 HOXC8P31273 242 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 IGBP1P78318 339 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 IKBKEQ14164 716 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 PKN1Q16512 942 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 CEP55Q53EZ4 464 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 DBF4BQ8NFT6 615 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 SDF4Q9BRK5 362 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 AGXT2Q9BYV1 514 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 OSBPL7Q9BZF2 842 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 GLT8D2Q9H1C3 349 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 ZSWIM6Q9HCJ5 1215 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 SLC9A2Q9UBY0 812 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 CYP46A1Q9Y6A2 500 aa17.41■□□□□ 0.38
LPCAT4-204ENST00000563240 TANC1Q9C0D5 1861 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 ABHD14A-ACY1A0A1B0GW23 586 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 SREBF1P36956 1147 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 CLK2P49760 499 aaKnown RBP17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 PPFIA1Q13136 1202 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■■■□ 21.4
LPCAT4-204ENST00000563240 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 SMARCAD1Q9H4L7 1026 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 AGO4Q9HCK5 861 aaKnown RBP17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 ERAP1Q9NZ08 941 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 NRCAMQ92823 1304 aa17.4■□□□□ 0.38
LPCAT4-204ENST00000563240 LCHNA4D1U4 455 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 ACTR2P61160 394 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 TAP1Q03518 808 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 ITGB3BPQ13352 177 aaPredicted RBP17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 GRIK4Q16099 956 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 NTRK3Q16288 839 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 RUFY4Q6ZNE9 571 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 FBXL16Q8N461 479 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 RASGRP4Q8TDF6 673 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 ZBTB10Q96DT7 871 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 PCYT2Q99447 389 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 ZMYND12Q9H0C1 365 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 EMSYQ7Z589 1322 aa17.39■□□□□ 0.37
LPCAT4-204ENST00000563240 GBF1Q92538 1859 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 FAM86B1E9PN63 330 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 MEIS1O00470 390 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 FAM86B2P0C5J1 330 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 ADAM17P78536 824 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 STK3Q13188 491 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 SPRED2Q7Z698 418 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 PLA2G4DQ86XP0 818 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 AZI2Q9H6S1 392 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
LPCAT4-204ENST00000563240 EPOPA6NHQ4 379 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 INSRRP14616 1297 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 EVCP57679 992 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 PLEKHG4Q58EX7 1191 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 TEX2Q8IWB9 1127 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 MYOCDQ8IZQ8 938 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 SEPT8Q92599 483 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 RNF26Q9BY78 433 aaPredicted RBP17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 TUBE1Q9UJT0 475 aa17.37■□□□□ 0.37
LPCAT4-204ENST00000563240 MTUS1Q9ULD2 1270 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms