RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CCDC68Q9H2F9 335 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 TMEM165Q9HC07 324 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 UBN1Q9NPG3 1134 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 HPF1Q9NWY4 346 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ZSWIM5Q9P217 1185 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 AASSQ9UDR5 926 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ANKRD6Q9Y2G4 727 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 RRP7AQ9Y3A4 280 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 KNSTRNQ9Y448 316 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SYNJ2BP-COX16A0A087WUM0 186 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 CAPN9O14815 690 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 RFPL3O75679 317 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 PRKD3O94806 890 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 DDX58O95786 925 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 LTFP02788 710 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 VEGFAP15692 232 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 ELF1P32519 619 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 KRT9P35527 623 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 MATR3P43243 847 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMG1-207ENST00000563235 GIPRP48546 466 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ZBTB17Q13105 803 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SSPNQ14714 243 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 TAF7Q15545 349 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 PKDCCQ504Y2 493 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 AKNAD1Q5T1N1 836 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 POTEEQ6S8J3 1075 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 LPCAT2Q7L5N7 544 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 CCDC84Q86UT8 332 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 NLRP10Q86W26 655 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 FCHSD1Q86WN1 690 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SPATA2LQ8IUW3 424 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SLC30A5Q8TAD4 765 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SCG3Q8WXD2 468 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 STK31Q9BXU1 1019 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 EHMT1Q9H9B1 1298 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 XAB2Q9HCS7 855 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 HPS4Q9NQG7 708 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 DISC1Q9NRI5 854 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 KRT82Q9NSB4 513 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 QPCTLQ9NXS2 382 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 CFDP1Q9UEE9 299 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 TBC1D29Q9UFV1 150 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 DOLKQ9UPQ8 538 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ARHGEF40Q8TER5 1519 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 TBKBP1A7MCY6 615 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 B4DLN1 442 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 CACNB4O00305 520 aaPredicted RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 ZBTB14O43829 449 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 SNUPNO95149 360 aaKnown RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 ADRB2P07550 413 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 TNNT1P13805 278 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 CYP2C19P33261 490 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 ATP5OP48047 213 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 PPARDQ03181 441 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 GTF2H3Q13889 308 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 PRKG1Q13976 671 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 KCNB1Q14721 858 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 GRIN2CQ14957 1233 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 TEAD4Q15561 434 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 FILIP1LQ4L180 1135 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 YOD1Q5VVQ6 348 aaPredicted RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 RAB12Q6IQ22 244 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 RPUSD3Q6P087 351 aaKnown RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 RNF168Q8IYW5 571 aaPredicted RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 SLC7A5P1Q8MH63 180 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 ANKK1Q8NFD2 765 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 SHC3Q92529 594 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 FATE1Q969F0 183 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 RUSC1Q9BVN2 902 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 LSM14BQ9BX40 385 aaKnown RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 VPS11Q9H270 941 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 SEPT10Q9P0V9 454 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 FAM8A1Q9UBU6 413 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 ITGB1BP2Q9UKP3 347 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 ZNF711Q9Y462 761 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 FER1L4A9Z1Z3 1794 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 CYP2D7A0A087X1C5 515 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 A0A1W2PPH5 198 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 A6NLC8 198 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 AP3B1O00203 1094 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 KINO60870 393 aaKnown RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 LARGE1O95461 756 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 CPEP16870 476 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 TMEM11P17152 192 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 ATP4AP20648 1035 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 PPM1AP35813 382 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 KCNJ6P48051 423 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 HSPA2P54652 639 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 DRG2P55039 364 aaKnown RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 NR1H2P55055 460 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 HTRA3P83110 453 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 IMMTQ16891 758 aaKnown RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 KRTCAP3Q53RY4 240 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 LRRC71Q8N4P6 559 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 C7orf31Q8N865 590 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 CCDC148Q8NFR7 591 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms