RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 HRKO00198 91 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 SCDO00767 359 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 CDK11BP21127 795 aaKnown RBP7.85□□□□□ -1.15
LINC00557-201ENST00000563184 FBLN1P23142 703 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 EVA1CP58658 441 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 TMEM62Q0P6H9 643 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 STAT4Q14765 748 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 ZNF605Q86T29 641 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 MIB1Q86YT6 1006 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 ANKRD13AQ8IZ07 590 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 TTLL11Q8NHH1 800 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 SPTLC3Q9NUV7 552 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 B3GALT1Q9Y5Z6 326 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 ATP23Q9Y6H3 246 aa7.85□□□□□ -1.15
LINC00557-201ENST00000563184 ACOT7O00154 380 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 ABLIM1O14639 778 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 FKBP9O95302 570 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 C4BPAP04003 597 aaKnown RBP7.84□□□□□ -1.15
LINC00557-201ENST00000563184 ANAPC15P60006 121 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 GRIN1Q05586 938 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 MPZL3Q6UWV2 235 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 PRR23BQ6ZRT6 265 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 FKBP9P1Q75LS8 142 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 TMC6Q7Z403 805 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 GPR101Q96P66 508 aaPredicted RBP7.84□□□□□ -1.15
LINC00557-201ENST00000563184 TTC1Q99614 292 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 IFT22Q9H7X7 185 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 KCNK12Q9HB15 430 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 MCM8Q9UJA3 840 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 NUB1Q9Y5A7 615 aa7.84□□□□□ -1.15
LINC00557-201ENST00000563184 MYOCOSA0A1B0GUC4 107 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 GPR39O43194 453 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 ZEB2O60315 1214 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 PTPN1P18031 435 aaKnown RBP7.83□□□□□ -1.16
LINC00557-201ENST00000563184 LSSP48449 732 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 IL2P60568 153 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 ZNF200P98182 395 aaPredicted RBP7.83□□□□□ -1.16
LINC00557-201ENST00000563184 BTBD8Q5XKL5 378 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 TRIM48Q8IWZ4 208 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 FAM126BQ8IXS8 530 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 ATL2Q8NHH9 583 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 EMC7Q9NPA0 242 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 PHLDB1Q86UU1 1377 aa7.83□□□□□ -1.16
LINC00557-201ENST00000563184 PPM1GO15355 546 aaPredicted RBP7.82□□□□□ -1.16
LINC00557-201ENST00000563184 TGM5O43548 720 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 BRINP1O60477 761 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 BUB1BO60566 1050 aaPredicted RBP7.82□□□□□ -1.16
LINC00557-201ENST00000563184 PMLP29590 882 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 SART3Q15020 963 aaKnown RBP7.82□□□□□ -1.16
LINC00557-201ENST00000563184 POU5F2Q8N7G0 328 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 KIAA1958Q8N8K9 716 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 STAG1Q8WVM7 1258 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 ALG3Q92685 438 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 NSUN3Q9H649 340 aaKnown RBP7.82□□□□□ -1.16
LINC00557-201ENST00000563184 KCNH7Q9NS40 1196 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 RIC8BQ9NVN3 520 aa7.82□□□□□ -1.16
LINC00557-201ENST00000563184 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.81□□□□□ -1.16
LINC00557-201ENST00000563184 RASSF10A6NK89 507 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 H7C1D1 291 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 LRG1P02750 347 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 ASGR2P07307 311 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 CPEP16870 476 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 SLC9A1P19634 815 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 GJA4P35212 333 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 KPNA1P52294 538 aaPredicted RBP7.81□□□□□ -1.16
LINC00557-201ENST00000563184 KIF11P52732 1056 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
LINC00557-201ENST00000563184 PAN2Q504Q3 1202 aaKnown RBP7.81□□□□□ -1.16
LINC00557-201ENST00000563184 EP400NLQ6ZTU2 488 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 AMIGO3Q86WK7 504 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 EFHBQ8N7U6 833 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 WDR66Q8TBY9 1149 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 ELF4Q99607 663 aaPredicted RBP7.81□□□□□ -1.16
LINC00557-201ENST00000563184 MCOLN1Q9GZU1 580 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 EPB41L4BQ9H329 900 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 CNTD2Q9H8S5 307 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 DTLQ9NZJ0 730 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 APOBEC2Q9Y235 224 aaKnown RBP7.81□□□□□ -1.16
LINC00557-201ENST00000563184 SPO11Q9Y5K1 396 aa7.81□□□□□ -1.16
LINC00557-201ENST00000563184 IRS2Q9Y4H2 1338 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 PEX10O60683 326 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 HIP1RO75146 1068 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 FAHP16930 419 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 THBS2P35442 1172 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 STAT5AP42229 794 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 TMPRSS15P98073 1019 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 CR1LQ2VPA4 569 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 CATSPEREQ5SY80 951 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 RNF219Q5W0B1 726 aaPredicted RBP7.8□□□□□ -1.16
LINC00557-201ENST00000563184 OLFML2BQ68BL8 750 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 OGFOD2Q6N063 350 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 CC2D1AQ6P1N0 951 aaPredicted RBP7.8□□□□□ -1.16
LINC00557-201ENST00000563184 FAM26EQ8N5C1 309 aa7.8□□□□□ -1.16
LINC00557-201ENST00000563184 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
LINC00557-201ENST00000563184 MBD1Q9UIS9 605 aaPredicted RBP7.8□□□□□ -1.16
LINC00557-201ENST00000563184 SDHAP31040 664 aa7.79□□□□□ -1.16
LINC00557-201ENST00000563184 CDR1P51861 262 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms