RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CEBPZQ03701 1054 aaKnown RBP21.21■□□□□ 0.99
RAB40C-207ENST00000563109 PPP2R5CQ13362 524 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 MIS18BP1Q6P0N0 1132 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 MIER3Q7Z3K6 550 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 RDM1Q8NG50 284 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 USP28Q96RU2 1077 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 TSEN34Q9BSV6 310 aaKnown RBP21.21■□□□□ 0.99
RAB40C-207ENST00000563109 RAB34Q9BZG1 259 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 FTOQ9C0B1 505 aaKnown RBP eCLIP21.21■□□□□ 0.99
RAB40C-207ENST00000563109 UNC45AQ9H3U1 944 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 VAV3Q9UKW4 847 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 CFAP45Q9UL16 551 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 CLIC4Q9Y696 253 aa21.21■□□□□ 0.99
RAB40C-207ENST00000563109 MOXD2PA6NHM9 499 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 CCDC85CA6NKD9 419 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 CTAGE5O15320 804 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 CCNE2O96020 404 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 PSAPP07602 524 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 NCLP19338 710 aaKnown RBP21.2■□□□□ 0.98
RAB40C-207ENST00000563109 TCF7P36402 384 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-207ENST00000563109 IRX5P78411 483 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-207ENST00000563109 STK38Q15208 465 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 KCNA10Q16322 511 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 ARL6IP4Q66PJ3 421 aaKnown RBP21.2■□□□□ 0.98
RAB40C-207ENST00000563109 NCAPH2Q6IBW4 605 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 DTHD1Q6ZMT9 781 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 C4orf32Q8N8J7 132 aa21.2■□□□□ 0.98
RAB40C-207ENST00000563109 POTEFA5A3E0 1075 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 PPFIA4O75335 1185 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 ASGR1P07306 291 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 SUPT20HL2P0C7V6 817 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 HOXD8P13378 290 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-207ENST00000563109 NASPP49321 788 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-207ENST00000563109 KRT85P78386 507 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 DNM1Q05193 864 aaKnown RBP21.19■□□□□ 0.98
RAB40C-207ENST00000563109 AZI2Q9H6S1 392 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 PCDHA10Q9Y5I2 948 aa21.19■□□□□ 0.98
RAB40C-207ENST00000563109 GSTTP1A0A1W2PQM5 241 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 BACH1O14867 736 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 CABYRO75952 493 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 YEATS4O95619 227 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 LGALS2P05162 132 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 ZNF286BP0CG31 522 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 TECP42680 631 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 FXR2P51116 673 aaKnown RBP eCLIP21.18■□□□□ 0.98
RAB40C-207ENST00000563109 ACLYP53396 1101 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 UTP14CQ5TAP6 766 aaKnown RBP21.18■□□□□ 0.98
RAB40C-207ENST00000563109 FAM160B1Q5W0V3 765 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 CCSAPQ6IQ19 270 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-207ENST00000563109 MTG1Q9BT17 334 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-207ENST00000563109 KATNAL1Q9BW62 490 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 DISC1Q9NRI5 854 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 TFIP11Q9UBB9 837 aaKnown RBP21.18■□□□□ 0.98
RAB40C-207ENST00000563109 ZNF215Q9UL58 517 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-207ENST00000563109 PHF24Q9UPV7 400 aa21.18■□□□□ 0.98
RAB40C-207ENST00000563109 PURAQ00577 322 aaKnown RBP21.17■□□□□ 0.98
RAB40C-207ENST00000563109 PTPAQ15257 358 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 B3GNT9Q6UX72 402 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 ABHD15Q6UXT9 468 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 ERMNQ8TAM6 284 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 GLG1Q92896 1179 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 FERMT2Q96AC1 680 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 GLT1D1Q96MS3 346 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 TELO2Q9Y4R8 837 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 EMSYQ7Z589 1322 aa21.17■□□□□ 0.98
RAB40C-207ENST00000563109 WDR81Q562E7 1941 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 VWA3AA6NCI4 1184 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 POTEMA6NI47 508 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 ATG7O95352 703 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 SOX10P56693 466 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 SPIRE1Q08AE8 756 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 SLC39A14Q15043 492 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 CXCL17Q6UXB2 119 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 KCNG4Q8TDN1 519 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 SMARCAD1Q9H4L7 1026 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 ZNF302Q9NR11 478 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 STK24Q9Y6E0 443 aa21.16■□□□□ 0.98
RAB40C-207ENST00000563109 MORC2Q9Y6X9 1032 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-207ENST00000563109 MYH9P35579 1960 aaKnown RBP21.16■□□□□ 0.98
RAB40C-207ENST00000563109 CENPFP49454 3210 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 A0A1W2PQ45 241 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-207ENST00000563109 A0A1W2PQY0 241 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 SPTLC2O15270 562 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 LGR5O75473 907 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 F2P00734 622 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 EN2P19622 333 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-207ENST00000563109 EPHA7Q15375 998 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 HAUS3Q68CZ6 603 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 LINC00301Q8NCQ3 95 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 NEK9Q8TD19 979 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 ATP6V0A1Q93050 837 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 VTI1AQ96AJ9 217 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 ERAP1Q9NZ08 941 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 LRWD1Q9UFC0 647 aa21.15■□□□□ 0.98
RAB40C-207ENST00000563109 EML1O00423 815 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 DKC1O60832 514 aaKnown RBP eCLIP21.14■□□□□ 0.97
RAB40C-207ENST00000563109 MARCKSP29966 332 aaPredicted RBP21.14■□□□□ 0.97
RAB40C-207ENST00000563109 SLC26A2P50443 739 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 STAT5BP51692 787 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 CHMP4BP1P59074 171 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms