RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 JADE2Q9NQC1 790 aa19.22■□□□□ 0.67
TNRC6A-209ENST00000562829 CHD9Q3L8U1 2897 aa19.22■□□□□ 0.67
TNRC6A-209ENST00000562829 LCHNA4D1U4 455 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 CPA1P15085 419 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 MARK3P27448 753 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 SKIV2LQ15477 1246 aaKnown RBP19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 TYW1BQ6NUM6 668 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 LMBR1Q8WVP7 490 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 SEPT1Q8WYJ6 367 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 GLG1Q92896 1179 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 JAKMIP1Q96N16 626 aaKnown RBP19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 TSPYL2Q9H2G4 693 aaPredicted RBP19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 RIC8AQ9NPQ8 531 aa19.21■□□□□ 0.67
TNRC6A-209ENST00000562829 SMCO2A6NFE2 343 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 EPOPA6NHQ4 379 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 hCG_1984214I3L0E3 225 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 STXBP3O00186 592 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 CAND2O75155 1236 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 GJB5O95377 273 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 CDC27P30260 824 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 METAP2P50579 478 aaKnown RBP eCLIP19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 FUT2Q10981 343 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 Q6ZUG5 572 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 MYOCDQ8IZQ8 938 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 ZNF713Q8N859 430 aaPredicted RBP19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 ANO3Q9BYT9 981 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 NRCAMQ92823 1304 aa19.2■□□□□ 0.66
TNRC6A-209ENST00000562829 MICAL3Q7RTP6 2002 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 GSTTP1A0A1W2PQM5 241 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 MAFGO15525 162 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 FOSP01100 380 aaPredicted RBP19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 AMHP03971 560 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 APOBRQ0VD83 1088 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 PPFIA1Q13136 1202 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 PLEKHG4Q58EX7 1191 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 BLOC1S2Q6QNY1 142 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 SPRED2Q7Z698 418 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 ATXN2LQ8WWM7 1075 aaKnown RBP19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 SEPT8Q92599 483 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 BRF1Q92994 677 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 RAD9AQ99638 391 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 MXRA8Q9BRK3 442 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 JPH1Q9HDC5 661 aaPredicted RBP19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 ERAP1Q9NZ08 941 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 MTUS1Q9ULD2 1270 aa19.19■□□□□ 0.66
TNRC6A-209ENST00000562829 CHD7Q9P2D1 2997 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 CCDC196A0A1B0GTZ2 297 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 HSPA4P34932 840 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 RCAN1P53805 252 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 IL27Q8NEV9 243 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 SDF4Q9BRK5 362 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 GLT8D2Q9H1C3 349 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 SMARCAD1Q9H4L7 1026 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 KCNH7Q9NS40 1196 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 FAM217BQ9NTX9 383 aaPredicted RBP19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 TMEM260Q9NX78 707 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 SLC9A2Q9UBY0 812 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 SNX14Q9Y5W7 946 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 MTCH2Q9Y6C9 303 aa19.18■□□□□ 0.66
TNRC6A-209ENST00000562829 ADD1P35611 737 aaKnown RBP19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 ZNF76P36508 570 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 ADAM17P78536 824 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 AP3B2Q13367 1082 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 GRIK4Q16099 956 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 KRT40Q6A162 431 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 TAF2Q6P1X5 1199 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 CYP2W1Q8TAV3 490 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 AZI2Q9H6S1 392 aa19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 PRRC2BQ5JSZ5 2229 aaKnown RBP19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 COL4A4P53420 1690 aaPredicted RBP19.17■□□□□ 0.66
TNRC6A-209ENST00000562829 REC8O95072 547 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 IGBP1P78318 339 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 MRPS5P82675 430 aaKnown RBP19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 GRB10Q13322 594 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 PFKFB3Q16875 520 aaPredicted RBP19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 RSPH3Q86UC2 560 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 TEX2Q8IWB9 1127 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 GDPD5Q8WTR4 605 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 KCNB2Q92953 911 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 ASB2Q96Q27 587 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 TUBE1Q9UJT0 475 aa19.16■□□□□ 0.66
TNRC6A-209ENST00000562829 ARP10275 920 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 SCG2P13521 617 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 POU3F3P20264 500 aaPredicted RBP19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 CEP55Q53EZ4 464 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 JAKMIP3Q5VZ66 844 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 RUFY4Q6ZNE9 571 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 TGS1Q96RS0 853 aaKnown RBP19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 IFIH1Q9BYX4 1025 aaKnown RBP19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 OSBPL7Q9BZF2 842 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 TRPC6Q9Y210 931 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 INSL6Q9Y581 213 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 NFASCO94856 1347 aa19.15■□□□□ 0.66
TNRC6A-209ENST00000562829 LINC01553A4QN01 128 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 DDX39AO00148 427 aaKnown RBP19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 UPP2O95045 317 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 RPS6KB1P23443 525 aa19.14■□□□□ 0.65
TNRC6A-209ENST00000562829 PSMA5P28066 241 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms