RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 UBIAD1Q9Y5Z9 338 aa18.91■□□□□ 0.62
CDT1-202ENST00000562747 RBAK-RBAKDNI3L0D1 243 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 MAFGO15525 162 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 LARGE1O95461 756 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 CA3P07451 260 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 TFF2Q03403 129 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 SEMA3FQ13275 785 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 DGKDQ16760 1214 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 IL27Q8NEV9 243 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 PGBD1Q96JS3 809 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 MLXIPQ9HAP2 919 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 LIMCH1Q9UPQ0 1083 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 MYH7BA7E2Y1 1941 aa18.9■□□□□ 0.62
CDT1-202ENST00000562747 TET1Q8NFU7 2136 aa18.89■□□□□ 0.62
CDT1-202ENST00000562747 PFKMP08237 780 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 SUPT20HL2P0C7V6 817 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
CDT1-202ENST00000562747 ITGB5P18084 799 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 NLRP5P59047 1200 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 FAM47CQ5HY64 1035 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 JAKMIP3Q5VZ66 844 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 NECAB1Q8N987 351 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 GIMAP8Q8ND71 665 aaPredicted RBP18.89■□□□□ 0.61
CDT1-202ENST00000562747 SPATA33Q96N06 139 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 CERS4Q9HA82 394 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 JADE2Q9NQC1 790 aa18.89■□□□□ 0.61
CDT1-202ENST00000562747 PPFIA4O75335 1185 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 CTDNEP1O95476 244 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 XBP1P17861 261 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 ARHGAP4P98171 946 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 MTMR1Q13613 665 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 RABEP1Q15276 862 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 KRT40Q6A162 431 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 GALNT17Q6IS24 598 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 METTL7BQ6UX53 244 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 SPRED2Q7Z698 418 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 WASF1Q92558 559 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 MXRA8Q9BRK3 442 aa18.88■□□□□ 0.61
CDT1-202ENST00000562747 PRRC2BQ5JSZ5 2229 aaKnown RBP18.88■□□□□ 0.61
CDT1-202ENST00000562747 ADAMTS3O15072 1205 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 NCOR1O75376 2440 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 CYP3A4P08684 503 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 KCNQ1P51787 676 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 HSDL1Q3SXM5 330 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 CEP55Q53EZ4 464 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 DAGLBQ8NCG7 672 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 CRYGNQ8WXF5 182 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 ZSCAN31Q96LW9 406 aaPredicted RBP18.87■□□□□ 0.61
CDT1-202ENST00000562747 AIFM3Q96NN9 605 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 ORC3Q9UBD5 711 aaPredicted RBP18.87■□□□□ 0.61
CDT1-202ENST00000562747 PCDHA4Q9UN74 947 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 MTCH2Q9Y6C9 303 aa18.87■□□□□ 0.61
CDT1-202ENST00000562747 PITPNM1O00562 1244 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 IQCF3P0C7M6 154 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 BMP1P13497 986 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 KCNA2P16389 499 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 CYFIP1Q7L576 1253 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 NIPA1Q7RTP0 329 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 NSUN7Q8NE18 718 aaKnown RBP18.86■□□□□ 0.61
CDT1-202ENST00000562747 TBC1D32Q96NH3 1257 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 CTAGE1Q96RT6 745 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 KATNAL1Q9BW62 490 aa18.86■□□□□ 0.61
CDT1-202ENST00000562747 TRIP12Q14669 1992 aaPredicted RBP18.86■□□□□ 0.61
CDT1-202ENST00000562747 NOP56O00567 594 aaKnown RBP18.85■□□□□ 0.61
CDT1-202ENST00000562747 SORBS3O60504 671 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 ATP9AO75110 1047 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 F2P00734 622 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 RFC2P35250 354 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 ZNF76P36508 570 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 TAP1Q03518 808 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 PTPN11Q06124 597 aaPredicted RBP18.85■□□□□ 0.61
CDT1-202ENST00000562747 BLIDQ8IZY5 108 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 RASGRP4Q8TDF6 673 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 KAT2BQ92831 832 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 SLC9A7Q96T83 725 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
CDT1-202ENST00000562747 KCNH7Q9NS40 1196 aa18.85■□□□□ 0.61
CDT1-202ENST00000562747 M0R2N6 131 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 MEIS1O00470 390 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 ST18O60284 1047 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 ACTN1P12814 892 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 FDPSP14324 419 aaKnown RBP18.84■□□□□ 0.61
CDT1-202ENST00000562747 POU3F3P20264 500 aaPredicted RBP18.84■□□□□ 0.61
CDT1-202ENST00000562747 ST3GAL1Q11201 340 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 HERC6Q8IVU3 1022 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 CYP2W1Q8TAV3 490 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 GPR20Q99678 358 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 ALG1Q9BT22 464 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 PHF20Q9BVI0 1012 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 BACH2Q9BYV9 841 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 DOCK5Q9H7D0 1870 aa18.84■□□□□ 0.61
CDT1-202ENST00000562747 NFASCO94856 1347 aa18.83■□□□□ 0.61
CDT1-202ENST00000562747 HAS3O00219 553 aa18.83■□□□□ 0.6
CDT1-202ENST00000562747 CIITAP33076 1130 aa18.83■□□□□ 0.6
CDT1-202ENST00000562747 CHMP4BP1P59074 171 aa18.83■□□□□ 0.6
CDT1-202ENST00000562747 GPNMBQ14956 572 aa18.83■□□□□ 0.6
CDT1-202ENST00000562747 SKIV2LQ15477 1246 aaKnown RBP18.83■□□□□ 0.6
CDT1-202ENST00000562747 NPY5RQ15761 445 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms