RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ERAP1Q9NZ08 941 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 SLC9A2Q9UBY0 812 aa20.32■□□□□ 0.84
CMTM3-204ENST00000562357 EMSYQ7Z589 1322 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 PBX2P40425 430 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 ANAPC15P60006 121 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 NTRK3Q16288 839 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 PKN1Q16512 942 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 NIPA1Q7RTP0 329 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 TNPO1Q92973 898 aaKnown RBP20.31■□□□□ 0.84
CMTM3-204ENST00000562357 RNPEPQ9H4A4 650 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 SMARCAD1Q9H4L7 1026 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 SLC28A3Q9HAS3 691 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 TCEAL9Q9UHQ7 104 aa20.31■□□□□ 0.84
CMTM3-204ENST00000562357 TANC1Q9C0D5 1861 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 NFASCO94856 1347 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 NRCAMQ92823 1304 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 PPFIA3O75145 1194 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 CAND2O75155 1236 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 CDKL5O76039 1030 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 FOSL2P15408 326 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 NLRP5P59047 1200 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 ZNF618Q5T7W0 954 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 CNKSR3Q6P9H4 555 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 PHOSPHO2Q8TCD6 241 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 SH3GLB2Q9NR46 395 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 SETD4Q9NVD3 440 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 VPS54Q9P1Q0 977 aa20.3■□□□□ 0.84
CMTM3-204ENST00000562357 RSPH10B2B2RC85 870 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 KIF28PB7ZC32 967 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 MEIS1O00470 390 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 TREHO43280 583 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 EFCAB14O75071 495 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 DEXIO95424 95 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 RSPH10BP0C881 870 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 MARK3P27448 753 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 HOXC8P31273 242 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-204ENST00000562357 PPFIA1Q13136 1202 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 STK3Q13188 491 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 ANKRD1Q15327 319 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 PLA2G4DQ86XP0 818 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 CYP2W1Q8TAV3 490 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 VWCEQ96DN2 955 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 AGO4Q9HCK5 861 aaKnown RBP20.29■□□□□ 0.84
CMTM3-204ENST00000562357 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
CMTM3-204ENST00000562357 GSTTP1A0A1W2PQM5 241 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 CYP3A4P08684 503 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 ARP10275 920 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 TRIM71Q2Q1W2 868 aaKnown RBP20.28■□□□□ 0.84
CMTM3-204ENST00000562357 SLC17A8Q8NDX2 589 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 MYLIPQ8WY64 445 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 LARP6Q9BRS8 491 aaKnown RBP20.28■□□□□ 0.84
CMTM3-204ENST00000562357 C22orf23Q9BZE7 217 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 SLKQ9H2G2 1235 aaPredicted RBP20.28■□□□□ 0.84
CMTM3-204ENST00000562357 NKX2-4Q9H2Z4 354 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 TELO2Q9Y4R8 837 aa20.28■□□□□ 0.84
CMTM3-204ENST00000562357 CXCL10P02778 98 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 RABGGTBP53611 331 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 ACTR2P61160 394 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 HIC1Q14526 733 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 PPP2R2DQ66LE6 453 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 RSPH3Q86UC2 560 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 WNT8BQ93098 351 aa20.27■□□□□ 0.84
CMTM3-204ENST00000562357 GAS2L1Q99501 681 aaPredicted RBP20.27■□□□□ 0.84
CMTM3-204ENST00000562357 ABHD14A-ACY1A0A1B0GW23 586 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 NBNO60934 754 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 LGR5O75473 907 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 CTSHP09668 335 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 IKBKEQ14164 716 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
CMTM3-204ENST00000562357 TRPC6Q9Y210 931 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 DOCK5Q9H7D0 1870 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 SCN5AQ14524 2016 aa20.26■□□□□ 0.83
CMTM3-204ENST00000562357 LAMA2P24043 3122 aaKnown RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 RRN3P2A6NIE6 340 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 FAM86B1E9PN63 330 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 DDX39AO00148 427 aaKnown RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 IPO5O00410 1097 aaKnown RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 BACH1O14867 736 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 RPLP2P05387 115 aaKnown RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 FAM86B2P0C5J1 330 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 XBP1P17861 261 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 STAT5BP51692 787 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 ITGB3BPQ13352 177 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 GRIK4Q16099 956 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 FAM160B1Q5W0V3 765 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 GALNT17Q6IS24 598 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 HERC6Q8IVU3 1022 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 MAFAQ8NHW3 353 aaPredicted RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 ZNF577Q9BSK1 485 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 ZBED2Q9BTP6 218 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 TBC1D22BQ9NU19 505 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 TUBE1Q9UJT0 475 aa20.25■□□□□ 0.83
CMTM3-204ENST00000562357 YBX2Q9Y2T7 364 aaKnown RBP20.25■□□□□ 0.83
CMTM3-204ENST00000562357 SLC26A2P50443 739 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 WDR5P61964 334 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms