RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 MBTPS1Q14703 1052 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 ERICH6BQ5W0A0 696 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 CCDC155Q8N6L0 562 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 CAGE1Q8TC20 777 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 SEPT1Q8WYJ6 367 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 MTIF3Q9H2K0 278 aaKnown RBP10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 MSRAQ9UJ68 235 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 STXBP5LQ9Y2K9 1186 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 TANC1Q9C0D5 1861 aa10.81□□□□□ -0.68
NSMCE1-203ENST00000562039 FAM86B1E9PN63 330 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 RFXAPO00287 272 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 ARHGEF15O94989 841 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 FOSP01100 380 aaPredicted RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 FAM86B2P0C5J1 330 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 ACTN1P12814 892 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 FOSL2P15408 326 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 ATP2A2P16615 1042 aaKnown RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 IFNAR1P17181 557 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SREBF1P36956 1147 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 AK2P54819 239 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 ACTR2P61160 394 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 DEFB103AP81534 67 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SCRN1Q12765 414 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 AP3B2Q13367 1082 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 CEP55Q53EZ4 464 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 RUFY4Q6ZNE9 571 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SPRED2Q7Z698 418 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 REXO1Q8N1G1 1221 aaKnown RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 NECAB1Q8N987 351 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 GIMAP8Q8ND71 665 aaPredicted RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SLC17A8Q8NDX2 589 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 AFAP1L1Q8TED9 768 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 LMBR1Q8WVP7 490 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 GJA10Q969M2 543 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 CDHR1Q96JP9 859 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 PCYT2Q99447 389 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 TM6SF1Q9BZW5 370 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 AGO4Q9HCK5 861 aaKnown RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 JPH1Q9HDC5 661 aaPredicted RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 GJB4Q9NTQ9 266 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 SLC9A2Q9UBY0 812 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 ZNF215Q9UL58 517 aaPredicted RBP10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 TPCN1Q9ULQ1 816 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 KCNJ14Q9UNX9 436 aa10.8□□□□□ -0.68
NSMCE1-203ENST00000562039 NID2Q14112 1375 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 KAT6AQ92794 2004 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 RSPH10B2B2RC85 870 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 hCG_1984214I3L0E3 225 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 LARGE1O95461 756 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 CCNE2O96020 404 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 RSPH10BP0C881 870 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 RFC2P35250 354 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 PPFIA1Q13136 1202 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 PRR16Q569H4 304 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 SERINC5Q86VE9 423 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 TRIM22Q8IYM9 498 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 ZNF713Q8N859 430 aaPredicted RBP10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 FAM49AQ9H0Q0 323 aaPredicted RBP10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 SLKQ9H2G2 1235 aaPredicted RBP10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
NSMCE1-203ENST00000562039 MEIS1O00470 390 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 BACH1O14867 736 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 CA3P07451 260 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 PFKMP08237 780 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 IBSPP21815 317 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 IGFBP4P22692 258 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 KCNJ6P48051 423 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 EVCP57679 992 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 WDR5P61964 334 aaKnown RBP10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 TMEM62Q0P6H9 643 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 RAB30Q15771 203 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 CCDC85BQ15834 202 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 GRIK4Q16099 956 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 PPP2R2DQ66LE6 453 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 MICALL1Q8N3F8 863 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 FBXL16Q8N461 479 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 DBF4BQ8NFT6 615 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 MAFAQ8NHW3 353 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 CCDC12Q8WUD4 166 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 ZNF274Q96GC6 653 aaPredicted RBP10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 ZNF577Q9BSK1 485 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 SMARCAD1Q9H4L7 1026 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 AZI2Q9H6S1 392 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 SLC28A3Q9HAS3 691 aa10.78□□□□□ -0.68
NSMCE1-203ENST00000562039 COL6A3P12111 3177 aa10.77□□□□□ -0.69
NSMCE1-203ENST00000562039 IGLV3-22A0A075B6J6 115 aa10.77□□□□□ -0.69
NSMCE1-203ENST00000562039 ESYT2A0FGR8 921 aa10.77□□□□□ -0.69
NSMCE1-203ENST00000562039 LCHNA4D1U4 455 aa10.77□□□□□ -0.69
NSMCE1-203ENST00000562039 EPB41L2O43491 1005 aaKnown RBP10.77□□□□□ -0.69
NSMCE1-203ENST00000562039 CHMP2AO43633 222 aa10.77□□□□□ -0.69
NSMCE1-203ENST00000562039 EDIL3O43854 480 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms