RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 Q4G0T1 1027 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 TRIM43Q96BQ3 446 aaPredicted RBP26.51■■□□□ 1.83
SMPD3-202ENST00000561749 MBOAT7Q96N66 472 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 FOXD4L1Q9NU39 408 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 TRMT13Q9NUP7 481 aaKnown RBP26.51■■□□□ 1.83
SMPD3-202ENST00000561749 TMEM39AQ9NV64 488 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 PRKAG2Q9UGJ0 569 aa26.51■■□□□ 1.83
SMPD3-202ENST00000561749 MYH9P35579 1960 aaKnown RBP26.5■■□□□ 1.83
SMPD3-202ENST00000561749 H3BRB1 525 aa26.5■■□□□ 1.83
SMPD3-202ENST00000561749 GNL2Q13823 731 aaKnown RBP26.5■■□□□ 1.83
SMPD3-202ENST00000561749 PRPF38BQ5VTL8 546 aaKnown RBP26.5■■□□□ 1.83
SMPD3-202ENST00000561749 NFRKBQ6P4R8 1299 aa26.5■■□□□ 1.83
SMPD3-202ENST00000561749 MOXD1Q6UVY6 613 aa26.5■■□□□ 1.83
SMPD3-202ENST00000561749 TUT1Q9H6E5 874 aaKnown RBP26.5■■□□□ 1.83
SMPD3-202ENST00000561749 HDAC6Q9UBN7 1215 aa26.5■■□□□ 1.83
SMPD3-202ENST00000561749 DNAH12Q6ZR08 3092 aa26.5■■□□□ 1.83
SMPD3-202ENST00000561749 CEP290O15078 2479 aa26.49■■□□□ 1.83
SMPD3-202ENST00000561749 KIF28PB7ZC32 967 aa26.49■■□□□ 1.83
SMPD3-202ENST00000561749 CD4P01730 458 aa26.49■■□□□ 1.83
SMPD3-202ENST00000561749 ATP2B1P20020 1258 aa26.49■■□□□ 1.83
SMPD3-202ENST00000561749 TBC1D22BQ9NU19 505 aa26.49■■□□□ 1.83
SMPD3-202ENST00000561749 WNT7AO00755 349 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 C7orf31Q8N865 590 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 GLG1Q92896 1179 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 SLC5A5Q92911 643 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 SNX21Q969T3 373 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 PCYT2Q99447 389 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 SEZ6LQ9BYH1 1024 aa26.48■■□□□ 1.83
SMPD3-202ENST00000561749 GAS7O60861 476 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 GCFC2P16383 781 aaKnown RBP26.47■■□□□ 1.83
SMPD3-202ENST00000561749 MARK3P27448 753 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 MDM2Q00987 491 aaPredicted RBP26.47■■□□□ 1.83
SMPD3-202ENST00000561749 LRCH2Q5VUJ6 765 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 PPP4R3AQ6IN85 833 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 GDF6Q6KF10 455 aaPredicted RBP26.47■■□□□ 1.83
SMPD3-202ENST00000561749 HSCBQ8IWL3 235 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 FOXP1Q9H334 677 aaPredicted RBP26.47■■□□□ 1.83
SMPD3-202ENST00000561749 TCEAL9Q9UHQ7 104 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 TBX21Q9UL17 535 aa26.47■■□□□ 1.83
SMPD3-202ENST00000561749 ZNF215Q9UL58 517 aaPredicted RBP26.47■■□□□ 1.83
SMPD3-202ENST00000561749 CHMP2AO43633 222 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 CYP2C9P11712 490 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 ITGB8P26012 769 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 PTPN11Q06124 597 aaPredicted RBP26.46■■□□□ 1.83
SMPD3-202ENST00000561749 MCTP1Q6DN14 999 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 POTEDQ86YR6 584 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 ETNPPLQ8TBG4 499 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 NAP1L4Q99733 375 aaKnown RBP26.46■■□□□ 1.83
SMPD3-202ENST00000561749 TEKT3Q9BXF9 490 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 PPP1R12CQ9BZL4 782 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 GTF2IRD1Q9UHL9 959 aa26.46■■□□□ 1.83
SMPD3-202ENST00000561749 EMSYQ7Z589 1322 aa26.45■■□□□ 1.83
SMPD3-202ENST00000561749 H3BQV1 296 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 KIAA0355O15063 1070 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 LGR5O75473 907 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 SUPT20HL2P0C7V6 817 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 SMIM10L2AP0DMW4 78 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 SMIM10L2BP0DMW5 78 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 MAGEA10P43363 369 aaPredicted RBP26.45■■□□□ 1.82
SMPD3-202ENST00000561749 ZNF200P98182 395 aaPredicted RBP26.45■■□□□ 1.82
SMPD3-202ENST00000561749 KRT76Q01546 638 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 HIC1Q14526 733 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 SESTD1Q86VW0 696 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 RIT2Q99578 217 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 UNC45AQ9H3U1 944 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 RNPEPQ9H4A4 650 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 SMARCAD1Q9H4L7 1026 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 NOD1Q9Y239 953 aa26.45■■□□□ 1.82
SMPD3-202ENST00000561749 BACH1O14867 736 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 ATG7O95352 703 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 RAG1P15918 1043 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 PTGISQ16647 500 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 LARP1BQ659C4 914 aaKnown RBP26.44■■□□□ 1.82
SMPD3-202ENST00000561749 ZNF746Q6NUN9 644 aaPredicted RBP26.44■■□□□ 1.82
SMPD3-202ENST00000561749 ABHD15Q6UXT9 468 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 NOSTRINQ8IVI9 506 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 BADQ92934 168 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 AZI2Q9H6S1 392 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 SAMM50Q9Y512 469 aa26.44■■□□□ 1.82
SMPD3-202ENST00000561749 MARCH6O60337 910 aa26.43■■□□□ 1.82
SMPD3-202ENST00000561749 PSMD10O75832 226 aa26.43■■□□□ 1.82
SMPD3-202ENST00000561749 MIS18BP1Q6P0N0 1132 aa26.43■■□□□ 1.82
SMPD3-202ENST00000561749 CHRDL2Q6WN34 429 aa26.43■■□□□ 1.82
SMPD3-202ENST00000561749 CCDC60Q8IWA6 550 aaPredicted RBP26.43■■□□□ 1.82
SMPD3-202ENST00000561749 LBHD1Q9BQE6 289 aaPredicted RBP26.43■■□□□ 1.82
SMPD3-202ENST00000561749 KCNMB3Q9NPA1 279 aa26.43■■□□□ 1.82
SMPD3-202ENST00000561749 ERAP1Q9NZ08 941 aa26.43■■□□□ 1.82
SMPD3-202ENST00000561749 UMODL1Q5DID0 1318 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 CYP2C18P33260 490 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 STAT5BP51692 787 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 SWSAP1Q6NVH7 229 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 CTAGE1Q96RT6 745 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 HIPK3Q9H422 1215 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 SETD4Q9NVD3 440 aa26.42■■□□□ 1.82
SMPD3-202ENST00000561749 C17orf102A2RUQ5 167 aa26.41■■□□□ 1.82
SMPD3-202ENST00000561749 U2AF2P26368 475 aaKnown RBP eCLIP26.41■■□□□ 1.82
SMPD3-202ENST00000561749 MCM7P33993 719 aa26.41■■□□□ 1.82
SMPD3-202ENST00000561749 FAM160B1Q5W0V3 765 aa26.41■■□□□ 1.82
SMPD3-202ENST00000561749 SMAP1Q8IYB5 467 aaPredicted RBP26.41■■□□□ 1.82
SMPD3-202ENST00000561749 HAS1Q92839 578 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms