RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 MMP1P03956 469 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 BMP8BP34820 402 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 USP11P51784 963 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 ACTR2P61160 394 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 NONOQ15233 471 aaKnown RBP eCLIP15.8■□□□□ 0.12
TPM1-230ENST00000561266 PIK3AP1Q6ZUJ8 805 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 SESTD1Q86VW0 696 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 SEPT1Q8WYJ6 367 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 WASF1Q92558 559 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 MBOAT7Q96N66 472 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 NOC4LQ9BVI4 516 aaKnown RBP15.8■□□□□ 0.12
TPM1-230ENST00000561266 WNT8AQ9H1J5 351 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 JPH1Q9HDC5 661 aaPredicted RBP15.8■□□□□ 0.12
TPM1-230ENST00000561266 SLC9A2Q9UBY0 812 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 GTF2IRD1Q9UHL9 959 aa15.8■□□□□ 0.12
TPM1-230ENST00000561266 LAMA3Q16787 3333 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 CYP3A7-CYP3A51PA0A087WV96 503 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 IPO5O00410 1097 aaKnown RBP15.79■□□□□ 0.12
TPM1-230ENST00000561266 TLR3O15455 904 aaKnown RBP15.79■□□□□ 0.12
TPM1-230ENST00000561266 ST18O60284 1047 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 LGR5O75473 907 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 ATG7O95352 703 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 RAG1P15918 1043 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 CYP3A7P24462 503 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 HOXC8P31273 242 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 HABP4Q5JVS0 413 aaKnown RBP15.79■□□□□ 0.12
TPM1-230ENST00000561266 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 C16orf59Q7L2K0 433 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 KRT25Q7Z3Z0 450 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 GIMAP8Q8ND71 665 aaPredicted RBP15.79■□□□□ 0.12
TPM1-230ENST00000561266 ZNF577Q9BSK1 485 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 PRKAG2Q9UGJ0 569 aa15.79■□□□□ 0.12
TPM1-230ENST00000561266 SMIM10L2AP0DMW4 78 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 SMIM10L2BP0DMW5 78 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 XBP1P17861 261 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 MARK3P27448 753 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 KRT2P35908 639 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 CCL23P55773 120 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 PTPN11Q06124 597 aaPredicted RBP15.78■□□□□ 0.12
TPM1-230ENST00000561266 PTGISQ16647 500 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 Q4G0T1 1027 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 ABHD15Q6UXT9 468 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
TPM1-230ENST00000561266 ZBTB10Q96DT7 871 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 SCLYQ96I15 445 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 SEZ6LQ9BYH1 1024 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 UBE2OQ9C0C9 1292 aaKnown RBP15.78■□□□□ 0.12
TPM1-230ENST00000561266 HIPK3Q9H422 1215 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
TPM1-230ENST00000561266 IGKV6D-21A0A0A0MT36 114 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 CCDC194A0A1B0GVG4 234 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 KIF28PB7ZC32 967 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 CSF2RAP15509 400 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 ATP4AP20648 1035 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 ADAM17P78536 824 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 GPNMBQ14956 572 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 SHHQ15465 462 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 TRIM71Q2Q1W2 868 aaKnown RBP15.77■□□□□ 0.12
TPM1-230ENST00000561266 LETM2Q2VYF4 491 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 MFSD5Q6N075 450 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 C7orf31Q8N865 590 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 ETNPPLQ8TBG4 499 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 SLC5A5Q92911 643 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 LBHD1Q9BQE6 289 aaPredicted RBP15.77■□□□□ 0.12
TPM1-230ENST00000561266 SDF4Q9BRK5 362 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 KATNAL1Q9BW62 490 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 SETD4Q9NVD3 440 aa15.77■□□□□ 0.12
TPM1-230ENST00000561266 EVPLQ92817 2033 aa15.77■□□□□ 0.11
TPM1-230ENST00000561266 LAMA2P24043 3122 aaKnown RBP15.76■□□□□ 0.11
TPM1-230ENST00000561266 SOX1O00570 391 aaPredicted RBP15.76■□□□□ 0.11
TPM1-230ENST00000561266 TREHO43280 583 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 PSMD10O75832 226 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 ACRP10323 421 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 SETQ01105 290 aaPredicted RBP15.76■□□□□ 0.11
TPM1-230ENST00000561266 TRAF7Q6Q0C0 670 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 NEK8Q86SG6 692 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 CCDC60Q8IWA6 550 aaPredicted RBP15.76■□□□□ 0.11
TPM1-230ENST00000561266 FBXO18Q8NFZ0 1043 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 C8orf76Q96K31 380 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 OSBPL7Q9BZF2 842 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 UNC45AQ9H3U1 944 aa15.76■□□□□ 0.11
TPM1-230ENST00000561266 SIP14410 1827 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 EMSYQ7Z589 1322 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 SUPT20HL2P0C7V6 817 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
TPM1-230ENST00000561266 PLCB4Q15147 1175 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 MARCH8Q5T0T0 291 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 B3GNT9Q6UX72 402 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 HAS1Q92839 578 aa15.75■□□□□ 0.11
TPM1-230ENST00000561266 DDX25Q9UHL0 483 aaKnown RBP15.75■□□□□ 0.11
TPM1-230ENST00000561266 LOXHD1Q8IVV2 1947 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 STAT5BP51692 787 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 FPGSQ05932 587 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 UGCGQ16739 394 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 TCTN1Q2MV58 587 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 SWSAP1Q6NVH7 229 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 RUFY4Q6ZNE9 571 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
TPM1-230ENST00000561266 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms