RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ORC3Q9UBD5 711 aaPredicted RBP14.75□□□□□ -0.05
CTDSPL2-209ENST00000560620 KCNJ14Q9UNX9 436 aa14.75□□□□□ -0.05
CTDSPL2-209ENST00000560620 GSTTP1A0A1W2PQM5 241 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 LARGE1O95461 756 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 CYP3A4P08684 503 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 IQCF3P0C7M6 154 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 GNAT1P11488 350 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 SETQ01105 290 aaPredicted RBP14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 PTK7Q13308 1070 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 NIPA1Q7RTP0 329 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 TBCKQ8TEA7 893 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 GTF3C6Q969F1 213 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 IL17RAQ96F46 866 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 RNPEPQ9H4A4 650 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 SMARCAD1Q9H4L7 1026 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 SETD4Q9NVD3 440 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 ERAP1Q9NZ08 941 aa14.74□□□□□ -0.05
CTDSPL2-209ENST00000560620 NFASCO94856 1347 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 STK36Q9NRP7 1315 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 IPO5O00410 1097 aaKnown RBP14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 BACH1O14867 736 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 CKBP12277 381 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 ACTN1P12814 892 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 ACTR2P61160 394 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 ITGB3BPQ13352 177 aaPredicted RBP14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 GALNT17Q6IS24 598 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 Q7L0L9 218 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 LRRC8DQ7L1W4 858 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 DEFB123Q8N688 67 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 AFAP1L1Q8TED9 768 aa14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 TRIP12Q14669 1992 aaPredicted RBP14.73□□□□□ -0.05
CTDSPL2-209ENST00000560620 LAMA2P24043 3122 aaKnown RBP14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 IGLV3-22A0A075B6J6 115 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 CCDC194A0A1B0GVG4 234 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 TREHO43280 583 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 CTDNEP1O95476 244 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 PFKMP08237 780 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 SELPP16109 830 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 RFC2P35250 354 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 THPOP40225 353 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 FOSBP53539 338 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 TRIM29Q14134 588 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 HIC1Q14526 733 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 FAM177A1Q8N128 213 aaPredicted RBP14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 DHX38Q92620 1227 aaKnown RBP14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 FAM161BQ96MY7 647 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 CTAGE1Q96RT6 745 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 PHF20Q9BVI0 1012 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 BRMS1Q9HCU9 246 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 LIMCH1Q9UPQ0 1083 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 SAMM50Q9Y512 469 aa14.72□□□□□ -0.05
CTDSPL2-209ENST00000560620 SCN5AQ14524 2016 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 NRCAMQ92823 1304 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 STAT5BP51692 787 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 USP11P51784 963 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 IGBP1P78318 339 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 SMAD3P84022 425 aaKnown RBP14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 PPFIA1Q13136 1202 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 ZNF697Q5TEC3 545 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 FAM160B1Q5W0V3 765 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 GPR153Q6NV75 609 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 KRT25Q7Z3Z0 450 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 SERINC5Q86VE9 423 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 CKAP2LQ8IYA6 745 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 DAGLBQ8NCG7 672 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 CRYGNQ8WXF5 182 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 HERVK_113Q902F9 699 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 TNPO1Q92973 898 aaKnown RBP14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 GJB4Q9NTQ9 266 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 TBC1D22BQ9NU19 505 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 SLC4A7Q9Y6M7 1214 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 KAT6AQ92794 2004 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 SZT2Q5T011 3432 aa14.71□□□□□ -0.05
CTDSPL2-209ENST00000560620 EMSYQ7Z589 1322 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 TANC1Q9C0D5 1861 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 JAK2O60674 1132 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 PARNO95453 639 aaKnown RBP14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 CTSHP09668 335 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 CIITAP33076 1130 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 GRIK4Q16099 956 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 INF2Q27J81 1249 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 ZNF618Q5T7W0 954 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 MIS18BP1Q6P0N0 1132 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 TRMT1LQ7Z2T5 733 aaKnown RBP14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 CCDC83Q8IWF9 413 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 NSUN7Q8NE18 718 aaKnown RBP14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 LMBR1Q8WVP7 490 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 WNT8BQ93098 351 aa14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 CXXC1Q9P0U4 656 aaPredicted RBP14.7□□□□□ -0.06
CTDSPL2-209ENST00000560620 GRXCR1A8MXD5 290 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 RSPH10B2B2RC85 870 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 TDP2O95551 362 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 CCNE2O96020 404 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 RSPH10BP0C881 870 aa14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 RBM25P49756 843 aaKnown RBP14.69□□□□□ -0.06
CTDSPL2-209ENST00000560620 KRT76Q01546 638 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms