RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 OPLAHO14841 1288 aa20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 ZBTB5O15062 677 aa20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 GHRP10912 638 aa20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 GTF2F1P35269 517 aaKnown RBP eCLIP20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 UTP14CQ5TAP6 766 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 METTL7BQ6UX53 244 aa20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 RSPH3Q86UC2 560 aa20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 GPKOWQ92917 476 aaPredicted RBP eCLIP20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 CLP1Q92989 425 aaKnown RBP20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 RILPL2Q969X0 211 aa20.65■□□□□ 0.9
TSPAN3-208ENST00000560514 KLRF2D3W0D1 207 aa20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 LINC01565O15544 149 aa20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 ADAM15Q13444 863 aa20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 IFIT1BQ5T764 474 aaKnown RBP20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 IER5LQ5T953 404 aa20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 CYFIP1Q7L576 1253 aa20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 TRIOO75962 3097 aa20.64■□□□□ 0.89
TSPAN3-208ENST00000560514 NRCAMQ92823 1304 aa20.63■□□□□ 0.89
TSPAN3-208ENST00000560514 LAMA4Q16363 1823 aa20.63■□□□□ 0.89
TSPAN3-208ENST00000560514 STAM2O75886 525 aa20.63■□□□□ 0.89
TSPAN3-208ENST00000560514 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
TSPAN3-208ENST00000560514 LMBR1Q8WVP7 490 aa20.63■□□□□ 0.89
TSPAN3-208ENST00000560514 ZSWIM5Q9P217 1185 aa20.63■□□□□ 0.89
TSPAN3-208ENST00000560514 DOCK5Q9H7D0 1870 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 EYA4O95677 639 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 CHRNA1P02708 482 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 TAF2Q6P1X5 1199 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 TRIM50Q86XT4 487 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 STAG2Q8N3U4 1231 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 FBXL6Q8N531 539 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 GPR20Q99678 358 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 KRT23Q9C075 422 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 IRF2BPLQ9H1B7 796 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 PLAGL2Q9UPG8 496 aa20.62■□□□□ 0.89
TSPAN3-208ENST00000560514 ENPP3O14638 875 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 LINC00271P0C7V0 271 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 ZXDAP98168 799 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 SP4Q02446 784 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 IMMTQ16891 758 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 NAALADL2Q58DX5 795 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 P2RX5Q93086 422 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 BCAS3Q9H6U6 928 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 TTC3P53804 2025 aa20.61■□□□□ 0.89
TSPAN3-208ENST00000560514 FIBPO43427 364 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 GFRA3O60609 400 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 PPP1R11O60927 126 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 DGKIO75912 1065 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 ICAM3P32942 547 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 EFHBQ8N7U6 833 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 ZNF689Q96CS4 500 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 MTMR8Q96EF0 704 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 MSLNLQ96KJ4 702 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 CNNM2Q9H8M5 875 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 EHMT1Q9H9B1 1298 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 RC3H2Q9HBD1 1191 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 RTEL1Q9NZ71 1219 aa20.6■□□□□ 0.89
TSPAN3-208ENST00000560514 ADAM17P78536 824 aa20.59■□□□□ 0.89
TSPAN3-208ENST00000560514 COASYQ13057 564 aa20.59■□□□□ 0.89
TSPAN3-208ENST00000560514 LPIN1Q14693 890 aa20.59■□□□□ 0.89
TSPAN3-208ENST00000560514 SMRP1Q8NCR6 262 aa20.59■□□□□ 0.89
TSPAN3-208ENST00000560514 SPATA31C2B4DYI2 1134 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 LOC730098B7Z3J9 87 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 SDSP20132 328 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 NRIP1P48552 1158 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 SIGLEC14Q08ET2 396 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 TCF15Q12870 199 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 PPFIA1Q13136 1202 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 TSHZ1Q6ZSZ6 1077 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 CMTR2Q8IYT2 770 aaKnown RBP20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 GIMAP8Q8ND71 665 aaPredicted RBP20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 INPP4AQ96PE3 977 aaPredicted RBP20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 CLEC1BQ9P126 229 aa20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 MRPL42Q9Y6G3 142 aaKnown RBP20.58■□□□□ 0.89
TSPAN3-208ENST00000560514 ZDBF2Q9HCK1 2354 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 ITGB1P05556 798 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 STAG3L1P0CL83 205 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 MRPS9P82933 396 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 CAMK1Q14012 370 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 RUFY4Q6ZNE9 571 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 ADGRD2Q7Z7M1 963 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 RBM23Q86U06 439 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 KLHL23Q8NBE8 558 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 SPPL3Q8TCT6 385 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 MICAL1Q8TDZ2 1067 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 POF1BQ8WVV4 589 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 ATOH1Q92858 354 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 RPGRIP1Q96KN7 1286 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 PIGSQ96S52 555 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 PHF7Q9BWX1 381 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 FTHL17Q9BXU8 183 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 DIAPH3Q9NSV4 1193 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 MAD2L2Q9UI95 211 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 BAZ2BQ9UIF8 2168 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 TUBE1Q9UJT0 475 aa20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
TSPAN3-208ENST00000560514 KMT2EQ8IZD2 1858 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms