RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FUT2Q10981 343 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 NR1H3Q13133 447 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 MBTPS1Q14703 1052 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 CES5AQ6NT32 575 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 PSAPL1Q6NUJ1 521 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 TMEM184AQ6ZMB5 413 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 G2E3Q7L622 706 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 RETREG3Q86VR2 466 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 ANKRD35Q8N283 1001 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 C8orf58Q8NAV2 365 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 SPPL3Q8TCT6 385 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 MICAL1Q8TDZ2 1067 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 TGFBRAP1Q8WUH2 860 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 POF1BQ8WVV4 589 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 RUNDC1Q96C34 613 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 CTAGE1Q96RT6 745 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 KCNK17Q96T54 332 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 NOL10Q9BSC4 688 aaKnown RBP7.85□□□□□ -1.15
HERC1-208ENST00000560462 SCNM1Q9BWG6 230 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 TEX13BQ9BXU2 312 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 SLC4A5Q9BY07 1137 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 PDGFCQ9NRA1 345 aa7.85□□□□□ -1.15
HERC1-208ENST00000560462 SAP30BPQ9UHR5 308 aaKnown RBP7.85□□□□□ -1.15
HERC1-208ENST00000560462 LIMK1P53667 647 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 FKBP5Q13451 457 aaPredicted RBP7.84□□□□□ -1.15
HERC1-208ENST00000560462 SEPT2Q15019 361 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 LPAL2Q16609 132 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 DUSP6Q16828 381 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 NAALADL2Q58DX5 795 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 BRDTQ58F21 947 aaPredicted RBP7.84□□□□□ -1.15
HERC1-208ENST00000560462 SNRNP48Q6IEG0 339 aaKnown RBP7.84□□□□□ -1.15
HERC1-208ENST00000560462 PHLDB3Q6NSJ2 640 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 PROSER1Q86XN7 944 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
HERC1-208ENST00000560462 CLMPQ9H6B4 373 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 CYP26B1Q9NR63 512 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 SPATA6Q9NWH7 488 aaPredicted RBP7.84□□□□□ -1.15
HERC1-208ENST00000560462 SRPK3Q9UPE1 567 aa7.84□□□□□ -1.15
HERC1-208ENST00000560462 PDS5AQ29RF7 1337 aaKnown RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 MCM3APO60318 1980 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 TRIP12Q14669 1992 aaPredicted RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 ASB14A6NK59 587 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 KPNA6O60684 536 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 C1QL1O75973 258 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 HOXB1P14653 301 aaPredicted RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 GLULP15104 373 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 GUCY1A2P33402 732 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 ITIH3Q06033 890 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 BTG3Q14201 252 aaPredicted RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 AASDHQ4L235 1098 aaPredicted RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 ZNF618Q5T7W0 954 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 GDF6Q6KF10 455 aaPredicted RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 TRAF7Q6Q0C0 670 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 REPS2Q8NFH8 660 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 NSUN4Q96CB9 384 aaKnown RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 ADAM7Q9H2U9 754 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 FBXO28Q9NVF7 368 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 C9orf78Q9NZ63 289 aaPredicted RBP7.83□□□□□ -1.16
HERC1-208ENST00000560462 SERPINB13Q9UIV8 391 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 CA14Q9ULX7 337 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 RIPK3Q9Y572 518 aa7.83□□□□□ -1.16
HERC1-208ENST00000560462 SCN10AQ9Y5Y9 1956 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 RAD50Q92878 1312 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 CACNA1IQ9P0X4 2223 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.82□□□□□ -1.16
HERC1-208ENST00000560462 NARSO43776 548 aaKnown RBP7.82□□□□□ -1.16
HERC1-208ENST00000560462 BAG3O95817 575 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 TOP3BO95985 862 aaKnown RBP7.82□□□□□ -1.16
HERC1-208ENST00000560462 MTHFRP42898 656 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 CNTN2Q02246 1040 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 ZNF252P-AS1Q0IIN9 211 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 KCNC3Q14003 757 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 ATP2B3Q16720 1220 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 DUSP28Q4G0W2 176 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 TAPT1Q6NXT6 567 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 LLGL2Q6P1M3 1020 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 XRRA1Q6P2D8 792 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 KIAA1211Q6ZU35 1233 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 EEPD1Q7L9B9 569 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 FBXO16Q8IX29 292 aaPredicted RBP7.82□□□□□ -1.16
HERC1-208ENST00000560462 KLHL23Q8NBE8 558 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 PJA1Q8NG27 643 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 KLHDC4Q8TBB5 520 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 SEPT8Q92599 483 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 NELL1Q92832 810 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 LRIG1Q96JA1 1093 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 DBR1Q9UK59 544 aaKnown RBP7.82□□□□□ -1.16
HERC1-208ENST00000560462 PPP1R9AQ9ULJ8 1098 aa7.82□□□□□ -1.16
HERC1-208ENST00000560462 USP17L12C9JPN9 530 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 USP17L21D6R901 530 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 TK2O00142 265 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 EOMESO95936 686 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 ZNF853P0CG23 659 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 NOVA1P51513 510 aaKnown RBP7.81□□□□□ -1.16
HERC1-208ENST00000560462 BEND3Q5T5X7 828 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 CCDC102BQ68D86 513 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms