RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 AZI2Q9H6S1 392 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 ERAP1Q9NZ08 941 aa15.82■□□□□ 0.12
PKNOX1-209ENST00000560448 MSH4O15457 936 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 DHX15O43143 795 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 EDIL3O43854 480 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 BAG4O95429 457 aaKnown RBP15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 TDP2O95551 362 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 TCF7P36402 384 aaPredicted RBP15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 JAK3P52333 1124 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 TRIM60Q495X7 471 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 PLPPR4Q7Z2D5 763 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 FAM126BQ8IXS8 530 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 TEKT3Q9BXF9 490 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 ATP11BQ9Y2G3 1177 aa15.81■□□□□ 0.12
PKNOX1-209ENST00000560448 WDR64B1ANS9 1081 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 GAS7O60861 476 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 LGR5O75473 907 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 CLTBP09497 229 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 GNAT1P11488 350 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 ACTR2P61160 394 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 GUCY1B3Q02153 619 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 MFSD10Q14728 455 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 RILPL1Q5EBL4 403 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 LRCH2Q5VUJ6 765 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 MIS18BP1Q6P0N0 1132 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 C7orf31Q8N865 590 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 ETNPPLQ8TBG4 499 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 AFAP1L1Q8TED9 768 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 KAT2BQ92831 832 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 KCNMB3Q9NPA1 279 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 FOXD4L1Q9NU39 408 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 ALPK3Q96L96 1907 aa15.8■□□□□ 0.12
PKNOX1-209ENST00000560448 IGKV6D-21A0A0A0MT36 114 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 GSTTP1A0A1W2PQM5 241 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 NEMFO60524 1076 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 DTNBO60941 627 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 PSMD10O75832 226 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 CD4P01730 458 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 PSEN2P49810 448 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 TLE2Q04725 743 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 KIAA0753Q2KHM9 967 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 EARS2Q5JPH6 523 aaKnown RBP15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 C7orf61Q8IZ16 206 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 PKD2L1Q9P0L9 805 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 GTF2IRD1Q9UHL9 959 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 PCDHA10Q9Y5I2 948 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 GRIN2DO15399 1336 aa15.79■□□□□ 0.12
PKNOX1-209ENST00000560448 LAD1O00515 517 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 MARCH6O60337 910 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 PQBP1O60828 265 aaKnown RBP15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 RPLP2P05387 115 aaKnown RBP15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 PSAPP07602 524 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 ZNF286BP0CG31 522 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 FOSBP53539 338 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 PPP2R5CQ13362 524 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 ABHD15Q6UXT9 468 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 BRAPQ7Z569 592 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 GLG1Q92896 1179 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 BCAS3Q9H6U6 928 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 DOCK5Q9H7D0 1870 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 NRCAMQ92823 1304 aa15.78■□□□□ 0.12
PKNOX1-209ENST00000560448 KIAA0355O15063 1070 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 SLC37A4O43826 429 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 DKC1O60832 514 aaKnown RBP eCLIP15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 HOXC8P31273 242 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 STAT5BP51692 787 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 PSMC6P62333 389 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 SP4Q02446 784 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 FAAP100Q0VG06 881 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 B3GNT9Q6UX72 402 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 CCDC155Q8N6L0 562 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 PDLIM7Q9NR12 457 aa15.77■□□□□ 0.12
PKNOX1-209ENST00000560448 SORBS3O60504 671 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 CCNE2O96020 404 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 CALCRLQ16602 461 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 MCTP1Q6DN14 999 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 FAM167AQ96KS9 214 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 ZNF302Q9NR11 478 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 DISC1Q9NRI5 854 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 TMEM39AQ9NV64 488 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 TBX21Q9UL17 535 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 NOD1Q9Y239 953 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 SAMM50Q9Y512 469 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 MAFBQ9Y5Q3 323 aaPredicted RBP15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 PDE4DIPQ5VU43 2346 aa15.77■□□□□ 0.11
PKNOX1-209ENST00000560448 FAM205CA6NFA0 338 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 RRN3P2A6NIE6 340 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 BACH1O14867 736 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 TNRC18O15417 2968 aaPredicted RBP15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 B4GALT4O60513 344 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 CAND2O75155 1236 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 PARNO95453 639 aaKnown RBP15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 TTC38Q5R3I4 469 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 UTP14CQ5TAP6 766 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms