RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KCNA2P16389 499 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 GNA11P29992 359 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 RABGGTBP53611 331 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 CHMP4BP1P59074 171 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 PTK7Q13308 1070 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 LRRC8DQ7L1W4 858 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 USP38Q8NB14 1042 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 DHX38Q92620 1227 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 GPR20Q99678 358 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 MXRA8Q9BRK3 442 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 C6orf50Q9HD87 102 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 SH3GLB2Q9NR46 395 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 TMEM260Q9NX78 707 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 HDAC6Q9UBN7 1215 aa17.34■□□□□ 0.37
SNRPA1-210ENST00000560383 ATP9AO75110 1047 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 CXCL10P02778 98 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 MTMR1Q13613 665 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 C8orf34Q49A92 452 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 TRIM22Q8IYM9 498 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 FAM177A1Q8N128 213 aaPredicted RBP17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 PGBD1Q96JS3 809 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
SNRPA1-210ENST00000560383 NOP56O00567 594 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CPLX1O14810 134 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 ADAMTS3O15072 1205 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 SORBS3O60504 671 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 PFKFB2O60825 505 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 PPFIA3O75145 1194 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 LGALS2P05162 132 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CYP3A4P08684 503 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CKBP12277 381 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 SCRN1Q12765 414 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 ADGRE1Q14246 886 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CEP55Q53EZ4 464 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CPLX2Q6PUV4 134 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 NIPA1Q7RTP0 329 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 REXO1Q8N1G1 1221 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 CYP2W1Q8TAV3 490 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 ALG1Q9BT22 464 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 KCNH7Q9NS40 1196 aa17.32■□□□□ 0.36
SNRPA1-210ENST00000560383 DOCK5Q9H7D0 1870 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 H3BRB1 525 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 MEIS1O00470 390 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 DEXIO95424 95 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 HOXC8P31273 242 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 AK2P54819 239 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 ARHGAP4P98171 946 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 STK3Q13188 491 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 TRIM71Q2Q1W2 868 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 JAKMIP3Q5VZ66 844 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 HERC6Q8IVU3 1022 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 VPS54Q9P1Q0 977 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 TELO2Q9Y4R8 837 aa17.31■□□□□ 0.36
SNRPA1-210ENST00000560383 KIF28PB7ZC32 967 aa17.3■□□□□ 0.36
SNRPA1-210ENST00000560383 EFCAB14O75071 495 aa17.3■□□□□ 0.36
SNRPA1-210ENST00000560383 CA3P07451 260 aa17.3■□□□□ 0.36
SNRPA1-210ENST00000560383 MYOGP15173 224 aa17.3■□□□□ 0.36
SNRPA1-210ENST00000560383 KCNJ6P48051 423 aa17.3■□□□□ 0.36
SNRPA1-210ENST00000560383 GPNMBQ14956 572 aa17.3■□□□□ 0.36
SNRPA1-210ENST00000560383 NFASCO94856 1347 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 EMSYQ7Z589 1322 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 STK36Q9NRP7 1315 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 NBNO60934 754 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 CDKL5O76039 1030 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 WDR5P61964 334 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 TJAP1Q5JTD0 557 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 TRAF7Q6Q0C0 670 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 SERINC5Q86VE9 423 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 SEPT1Q8WYJ6 367 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 THEGQ9P2T0 379 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
SNRPA1-210ENST00000560383 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 IGLV3-22A0A075B6J6 115 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 ABHD14A-ACY1A0A1B0GW23 586 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 GSTTP1A0A1W2PQM5 241 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 FAM86B1E9PN63 330 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 CAND2O75155 1236 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 FAM86B2P0C5J1 330 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 ARP10275 920 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 POU3F3P20264 500 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 IGFBP4P22692 258 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 CIITAP33076 1130 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 NEK4P51957 841 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 HIC1Q14526 733 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 NPY5RQ15761 445 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 GALNT17Q6IS24 598 aa17.28■□□□□ 0.36
SNRPA1-210ENST00000560383 DAGLBQ8NCG7 672 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms