RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TSC1Q92574 1164 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 CABS1Q96KC9 395 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 KRT10P13645 584 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 GARSP41250 739 aaKnown RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 RAPH1Q70E73 1250 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 CACNA2D3Q8IZS8 1091 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 ANKRD42Q8N9B4 389 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 DNAAF3Q8N9W5 541 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 MSTO1Q9BUK6 570 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 BHMT2Q9H2M3 363 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 SRPRBQ9Y5M8 271 aaKnown RBP14.59□□□□□ -0.07
TRAF3-208ENST00000560371 CPDO75976 1380 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 JCADQ9P266 1359 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 STK25O00506 426 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 SLFN14P0C7P3 912 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 DNAJC24Q6P3W2 148 aa14.59□□□□□ -0.07
TRAF3-208ENST00000560371 MCF2LO15068 1137 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 AP3B2Q13367 1082 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 MAPK6Q16659 721 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 WHAMMP3Q1A5X7 153 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 CEP95Q96GE4 821 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 CALN1Q9BXU9 219 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 CLDN3O15551 220 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 HEXIM1O94992 359 aaKnown RBP14.58□□□□□ -0.07
TRAF3-208ENST00000560371 GPSM2P81274 684 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 KIF23Q02241 960 aaPredicted RBP14.58□□□□□ -0.07
TRAF3-208ENST00000560371 SF3A3Q12874 501 aaKnown RBP eCLIP14.58□□□□□ -0.07
TRAF3-208ENST00000560371 LRRC8AQ8IWT6 810 aa14.58□□□□□ -0.07
TRAF3-208ENST00000560371 HEXIM2Q96MH2 286 aaKnown RBP14.58□□□□□ -0.07
TRAF3-208ENST00000560371 RAVER2Q9HCJ3 691 aaKnown RBP14.58□□□□□ -0.07
TRAF3-208ENST00000560371 RNF40O75150 1001 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 EFCAB13Q8IY85 973 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 TRIM56Q9BRZ2 755 aaKnown RBP14.58□□□□□ -0.08
TRAF3-208ENST00000560371 RASSF2P50749 326 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 TTLL4Q14679 1199 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 PIGOQ8TEQ8 1089 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 RAB3IPQ96QF0 476 aaPredicted RBP14.58□□□□□ -0.08
TRAF3-208ENST00000560371 DPH5Q9H2P9 285 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 PCDHA6Q9UN73 950 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 PPP2R2CQ9Y2T4 447 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 PCDHA8Q9Y5H6 950 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 FAM196BA6NMK8 535 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 CIITAP33076 1130 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 CTTNQ14247 550 aaKnown RBP14.58□□□□□ -0.08
TRAF3-208ENST00000560371 MCPH1Q8NEM0 835 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 FAM167AQ96KS9 214 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 FCER1AP12319 257 aa14.58□□□□□ -0.08
TRAF3-208ENST00000560371 ARL6IP4Q66PJ3 421 aaKnown RBP14.58□□□□□ -0.08
TRAF3-208ENST00000560371 VCXQ9H320 206 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 TOPORSQ9NS56 1045 aaPredicted RBP14.57□□□□□ -0.08
TRAF3-208ENST00000560371 WDR46O15213 610 aaKnown RBP14.57□□□□□ -0.08
TRAF3-208ENST00000560371 LDHAP00338 332 aaKnown RBP14.57□□□□□ -0.08
TRAF3-208ENST00000560371 SLC4A1P02730 911 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 IGKV5-2P06315 115 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 NSUN6Q8TEA1 469 aaKnown RBP14.57□□□□□ -0.08
TRAF3-208ENST00000560371 RUNDC3BQ96NL0 473 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 SH3GLB2Q9NR46 395 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 DENND3A2RUS2 1198 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 GBP1P32455 592 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 KCTD6Q8NC69 237 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 UBN1Q9NPG3 1134 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 PLEKHA8P1O95397 391 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 INHBAP08476 426 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 FASTKD5Q7L8L6 764 aaKnown RBP14.57□□□□□ -0.08
TRAF3-208ENST00000560371 ERCC6L2Q5T890 1561 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 THEM5Q8N1Q8 247 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 MROH7-TTC4A0A0A0MT08 1334 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 WDR64B1ANS9 1081 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 C10orf67Q8IYJ2 551 aa14.57□□□□□ -0.08
TRAF3-208ENST00000560371 GFPT2O94808 682 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 HOXA7P31268 230 aaPredicted RBP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 CASP14P31944 242 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 RABEP2Q9H5N1 569 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 RBBP5Q15291 538 aaKnown RBP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 SCARA5Q6ZMJ2 495 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 SP8Q8IXZ3 490 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 LINC00301Q8NCQ3 95 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 SMYD2Q9NRG4 433 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 HERC5Q9UII4 1024 aaKnown RBP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 CYP2D6P10635 497 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 ZNF18P17022 549 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 YWHAGP61981 247 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 TMTC4Q5T4D3 741 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 GRAMD1CQ8IYS0 662 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 DCLK2Q8N568 766 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 DONSONQ9NYP3 566 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 INPP5FQ9Y2H2 1132 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 PCDHB6Q9Y5E3 794 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 ARL13BQ3SXY8 428 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 RCSD1Q6JBY9 416 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 BCAP29Q9UHQ4 241 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 SEPT6Q14141 434 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 NFIXQ14938 502 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 PRPF38AQ8NAV1 312 aaKnown RBP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 S100BP04271 92 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms