RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RPLP2P05387 115 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 MYL3P08590 195 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 SUPT20HL2P0C7V6 817 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 GNAT1P11488 350 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 TCF7P36402 384 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 PRPHP41219 470 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 ACTR2P61160 394 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 BEX3Q00994 111 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 ITGB3BPQ13352 177 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 PPP2R5CQ13362 524 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 SNX17Q15036 470 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 EARS2Q5JPH6 523 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 SLC39A5Q6ZMH5 540 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 LENG1Q96BZ8 264 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-215ENST00000560207 DCDC2CA8MYV0 355 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 ARVCFO00192 962 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 EDIL3O43854 480 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 DTNBO60941 627 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 LGR5O75473 907 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 MCM7P33993 719 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 NUCB2P80303 420 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 PDIA5Q14554 519 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 CXCL17Q6UXB2 119 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 SLC43A3Q8NBI5 491 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 NEK9Q8TD19 979 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 GLG1Q92896 1179 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 ATP6V0A1Q93050 837 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 ZNF396Q96N95 335 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 SAMM50Q9Y512 469 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 MORC2Q9Y6X9 1032 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-215ENST00000560207 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 GSTTP1A0A1W2PQM5 241 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 MYADML2A6NDP7 307 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 HAS3O00219 553 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 SLC37A4O43826 429 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 LGALS2P05162 132 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 ZSCAN22P10073 491 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 MUTP22033 750 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 STAT5BP51692 787 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 TMEM63BQ5T3F8 832 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 ANKRD33Q7Z3H0 272 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 EXOC8Q8IYI6 725 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 C7orf31Q8N865 590 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 ERMNQ8TAM6 284 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 C16orf70Q9BSU1 422 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 DISC1Q9NRI5 854 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 PKD2L1Q9P0L9 805 aa13.58□□□□□ -0.24
RABGGTA-215ENST00000560207 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 BACH1O14867 736 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 SLC26A4O43511 780 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 ATP2B1P20020 1258 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 PSEN2P49810 448 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 CDK7P50613 346 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 MFSD10Q14728 455 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 B3GNT9Q6UX72 402 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 MIER3Q7Z3K6 550 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 POTEDQ86YR6 584 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 HAS1Q92839 578 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 ZNF302Q9NR11 478 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 CFAP45Q9UL16 551 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 PPME1Q9Y570 386 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 COL1A2P08123 1366 aa13.57□□□□□ -0.24
RABGGTA-215ENST00000560207 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 TXKP42681 527 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 TOB1P50616 345 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 ATP2C1P98194 919 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 SP4Q02446 784 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 RESTQ13127 1097 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 PTGDRQ13258 359 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 EPHA7Q15375 998 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 ZNF174Q15697 407 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 KIAA0753Q2KHM9 967 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 FAM43BQ6ZT52 329 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 ZNF710Q8N1W2 664 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 CCDC155Q8N6L0 562 aa13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 DIS3LQ8TF46 1054 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-215ENST00000560207 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms