RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 CHMP2AO43633 222 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 CIITAP33076 1130 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 CYP2C18P33260 490 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 HIC1Q14526 733 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 PTGISQ16647 500 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 MCTP1Q6DN14 999 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 SWSAP1Q6NVH7 229 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 NIPA1Q7RTP0 329 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 NEK8Q86SG6 692 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 TEX2Q8IWB9 1127 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 FAM126BQ8IXS8 530 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 TOX2Q96NM4 488 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 TUT1Q9H6E5 874 aaKnown RBP9.7□□□□□ -0.86
USP3-217ENST00000560070 SETD4Q9NVD3 440 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 DDX25Q9UHL0 483 aaKnown RBP9.7□□□□□ -0.86
USP3-217ENST00000560070 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
USP3-217ENST00000560070 C17orf102A2RUQ5 167 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
USP3-217ENST00000560070 SLC37A4O43826 429 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 GAS7O60861 476 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 CCNE2O96020 404 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 CD4P01730 458 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 SUPT20HL2P0C7V6 817 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 SMIM10L2AP0DMW4 78 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 SMIM10L2BP0DMW5 78 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 IGBP1P78318 339 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 ZNF174Q15697 407 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 UMODL1Q5DID0 1318 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 MROH7Q68CQ1 1323 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 FBXO18Q8NFZ0 1043 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 LENG9Q96B70 501 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 SCLYQ96I15 445 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 PCYT2Q99447 389 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 KATNAL1Q9BW62 490 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 UBE2OQ9C0C9 1292 aaKnown RBP9.69□□□□□ -0.86
USP3-217ENST00000560070 HIPK3Q9H422 1215 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 AZI2Q9H6S1 392 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 SAMM50Q9Y512 469 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.69□□□□□ -0.86
USP3-217ENST00000560070 CENPFP49454 3210 aa9.69□□□□□ -0.86
USP3-217ENST00000560070 NFASCO94856 1347 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 CYP3A7-CYP3A51PA0A087WV96 503 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 KIF28PB7ZC32 967 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 H3BQV1 296 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 HAS3O00219 553 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 WNT7AO00755 349 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 KIAA0355O15063 1070 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 F2P00734 622 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 TIMP1P01033 207 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 ACRP10323 421 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 CYP3A7P24462 503 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 STAT5BP51692 787 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 SETQ01105 290 aaPredicted RBP9.68□□□□□ -0.86
USP3-217ENST00000560070 Q4G0T1 1027 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 LRCH2Q5VUJ6 765 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 LARP1BQ659C4 914 aaKnown RBP9.68□□□□□ -0.86
USP3-217ENST00000560070 MIS18BP1Q6P0N0 1132 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 PDXDC2PQ6P474 469 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 NFRKBQ6P4R8 1299 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 ABHD15Q6UXT9 468 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 CKAP2LQ8IYA6 745 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 FAM177A1Q8N128 213 aaPredicted RBP9.68□□□□□ -0.86
USP3-217ENST00000560070 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 UNC45AQ9H3U1 944 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 SMARCAD1Q9H4L7 1026 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 GABBR1Q9UBS5 961 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 ZNF215Q9UL58 517 aaPredicted RBP9.68□□□□□ -0.86
USP3-217ENST00000560070 TRPC6Q9Y210 931 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 BAZ2BQ9UIF8 2168 aaKnown RBP9.68□□□□□ -0.86
USP3-217ENST00000560070 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
USP3-217ENST00000560070 TREHO43280 583 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 ATG7O95352 703 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 BAG4O95429 457 aaKnown RBP9.67□□□□□ -0.86
USP3-217ENST00000560070 HOXD8P13378 290 aaPredicted RBP9.67□□□□□ -0.86
USP3-217ENST00000560070 CSF2RAP15509 400 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 MCM7P33993 719 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 EPHB4P54760 987 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 PTPN11Q06124 597 aaPredicted RBP9.67□□□□□ -0.86
USP3-217ENST00000560070 NBR1Q14596 966 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 FAM160B1Q5W0V3 765 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 MIER3Q7Z3K6 550 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 DEFB128Q7Z7B8 93 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 TRAPPC12Q8WVT3 735 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 SLC5A5Q92911 643 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 ATP6V0A1Q93050 837 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 GDF15Q99988 308 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 SEZ6LQ9BYH1 1024 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 ZNF302Q9NR11 478 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 GTF2IRD1Q9UHL9 959 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 TBX21Q9UL17 535 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 KIF3AQ9Y496 699 aa9.67□□□□□ -0.86
USP3-217ENST00000560070 KIAA0100Q14667 2235 aaKnown RBP9.67□□□□□ -0.86
USP3-217ENST00000560070 K7ELQ4 463 aaPredicted RBP9.66□□□□□ -0.86
USP3-217ENST00000560070 LGR5O75473 907 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 PSMD10O75832 226 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 PSAPP07602 524 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms