RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TADA2BQ86TJ2 420 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 NDEL1Q9GZM8 345 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 DCDC2Q9UHG0 476 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 EIF2S1P05198 315 aaKnown RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 ADAM9Q13443 819 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 TDRD7Q8NHU6 1098 aaKnown RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 SMCR8Q8TEV9 937 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 COPEO14579 308 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 SH3GL1Q99961 368 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 RUBCNLQ9H714 662 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 ZNF556Q9HAH1 456 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 JAG2Q9Y219 1238 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 SMARCA1P28370 1054 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 HDLBPQ00341 1268 aaKnown RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 RUNX1T1Q06455 604 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 TTC8Q8TAM2 541 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 TADA1Q96BN2 335 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 A0A0G2JND7 137 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 C16orf96A6NNT2 1141 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 DYNLT1P63172 113 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 TRIP4Q15650 581 aaPredicted RBP14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 ADALQ6DHV7 355 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 RNF139Q8WU17 664 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 ZNF408Q9H9D4 720 aa14.86□□□□□ -0.03
CSPG4P12-202ENST00000559989 GOLGA8MH3BSY2 632 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 CDH2P19022 906 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 RCSD1Q6JBY9 416 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 LVRNQ6Q4G3 990 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 MRPL50Q8N5N7 158 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 NEK9Q8TD19 979 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 GCOM2Q9BZD3 368 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 DHX9Q08211 1270 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 GOLGA8FQ08AF8 430 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 GOLGA8DPQ0D2H9 430 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 CNGA3Q16281 694 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 CCDC184Q52MB2 194 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 TBC1D1Q86TI0 1168 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 ULK4Q96C45 1275 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 ADNPQ9H2P0 1102 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 TK2O00142 265 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 ETF1P62495 437 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 MAPRE2Q15555 327 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 FGD2Q7Z6J4 655 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 TRIM69Q86WT6 500 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 APPBP2Q92624 585 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 GPBP1L1Q9HC44 474 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 FNDC3AQ9Y2H6 1198 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 BFSP2Q13515 415 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 EPM2AIP1Q7L775 607 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 NBPF26B4DH59 902 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 PSMA4P25789 261 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 NBPF15Q8N660 670 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 AATFQ9NY61 560 aaKnown RBP eCLIP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 IRX1P78414 480 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 TBL3Q12788 808 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 NR1H3Q13133 447 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 DNAJC24Q6P3W2 148 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 NSMFQ6X4W1 530 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 C16orf62Q7Z3J2 963 aa14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 NOVA2Q9UNW9 492 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 MRPL11Q9Y3B7 192 aaKnown RBP14.85□□□□□ -0.03
CSPG4P12-202ENST00000559989 EFCAB5A4FU69 1503 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 ASXL1Q8IXJ9 1541 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 KRR1Q13601 381 aaKnown RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 NRBP2Q9NSY0 501 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 NSMCE4AQ9NXX6 385 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 EHD2Q9NZN4 543 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 GOLGA8TH3BQL2 631 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 GOLGA8HP0CJ92 632 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 NUGGCQ68CJ6 796 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 PBXIP1Q96AQ6 731 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 PARVBQ9HBI1 364 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 KRT37O76014 449 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 CA4P22748 312 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 PSMC2P35998 433 aaKnown RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 SNAP25P60880 206 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 MXD4Q14582 209 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 AKAP4Q5JQC9 854 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 H2AFY2Q9P0M6 372 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 UFL1O94874 794 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 TJP3O95049 919 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 DR1Q01658 176 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 LBRQ14739 615 aaKnown RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 SPATA1Q5VX52 437 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 LRRC8EQ6NSJ5 796 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 CDR2LQ86X02 465 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 ACSBG1Q96GR2 724 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 MAGEB5Q9BZ81 275 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 LRFN2Q9ULH4 789 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 WDR7Q9Y4E6 1490 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 AOX1Q06278 1338 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 SLCO1A2P46721 670 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 KIF23Q02241 960 aaPredicted RBP14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 IFT43Q96FT9 208 aa14.84□□□□□ -0.03
CSPG4P12-202ENST00000559989 CALN1Q9BXU9 219 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms