RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 NUCKS1Q9H1E3 243 aaKnown RBP23.97■■□□□ 1.43
PSMA4-215ENST00000559934 FKBP3Q00688 224 aaKnown RBP23.97■■□□□ 1.43
PSMA4-215ENST00000559934 ECM1Q16610 540 aa23.97■■□□□ 1.43
PSMA4-215ENST00000559934 FUKQ8N0W3 1084 aa23.97■■□□□ 1.43
PSMA4-215ENST00000559934 RIC8AQ9NPQ8 531 aa23.97■■□□□ 1.43
PSMA4-215ENST00000559934 SART1O43290 800 aaKnown RBP23.96■■□□□ 1.43
PSMA4-215ENST00000559934 COASYQ13057 564 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 CUL1Q13616 776 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 NEDD9Q14511 834 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 ASIC2Q16515 512 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 CEP57Q86XR8 500 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 TEX2Q8IWB9 1127 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 SUFUQ9UMX1 484 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 PPP2R2AP63151 447 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 PARP9Q8IXQ6 854 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 GJA10Q969M2 543 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 LRRC45Q96CN5 670 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 ACTR5Q9H9F9 607 aaPredicted RBP23.96■■□□□ 1.43
PSMA4-215ENST00000559934 ABCA3Q99758 1704 aa23.96■■□□□ 1.43
PSMA4-215ENST00000559934 ITGA4P13612 1032 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 GNA11P29992 359 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 SOGA3Q5TF21 947 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 REXO1Q8N1G1 1221 aaKnown RBP23.95■■□□□ 1.42
PSMA4-215ENST00000559934 SH3RF3Q8TEJ3 882 aaPredicted RBP23.95■■□□□ 1.42
PSMA4-215ENST00000559934 PIGSQ96S52 555 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 DONSONQ9NYP3 566 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 PHF20L1A8MW92 1017 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 DAPK3O43293 454 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 PSEN1P49768 467 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 MAGOHP61326 146 aaKnown RBP23.95■■□□□ 1.42
PSMA4-215ENST00000559934 SNCBQ16143 134 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 PROM2Q8N271 834 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 MAGOHBQ96A72 148 aaKnown RBP23.95■■□□□ 1.42
PSMA4-215ENST00000559934 NOC2LQ9Y3T9 749 aaKnown RBP23.95■■□□□ 1.42
PSMA4-215ENST00000559934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.95■■□□□ 1.42
PSMA4-215ENST00000559934 MYH7BA7E2Y1 1941 aa23.95■■□□□ 1.42
PSMA4-215ENST00000559934 OPLAHO14841 1288 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 EDIL3O43854 480 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 ACTN1P12814 892 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 USP11P51784 963 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 PTK2Q05397 1052 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 DZIP1Q86YF9 867 aaKnown RBP23.94■■□□□ 1.42
PSMA4-215ENST00000559934 ZNF444Q8N0Y2 327 aaPredicted RBP23.94■■□□□ 1.42
PSMA4-215ENST00000559934 SPZ1Q9BXG8 430 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 BTG4Q9NY30 223 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 AMACRQ9UHK6 382 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 HIBADHP31937 336 aaKnown RBP23.94■■□□□ 1.42
PSMA4-215ENST00000559934 BIRC3Q13489 604 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 CHADLQ6NUI6 762 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 DNAJC19Q96DA6 116 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 SCLT1Q96NL6 688 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 GANQ9H2C0 597 aa23.94■■□□□ 1.42
PSMA4-215ENST00000559934 SAP30BPQ9UHR5 308 aaKnown RBP23.94■■□□□ 1.42
PSMA4-215ENST00000559934 ELF1P32519 619 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 SCTRP47872 440 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 FXR2P51116 673 aaKnown RBP eCLIP23.93■■□□□ 1.424e-7■□□□□ 8.7
PSMA4-215ENST00000559934 ARHGAP27Q6ZUM4 889 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 TRIM59Q8IWR1 403 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 METTL13Q8N6R0 699 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 N4BP2L2Q92802 583 aaPredicted RBP23.93■■□□□ 1.42
PSMA4-215ENST00000559934 AIPL1Q9NZN9 384 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 TPX2Q9ULW0 747 aaKnown RBP23.93■■□□□ 1.42
PSMA4-215ENST00000559934 MMP14P50281 582 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 CACNB1Q02641 598 aaPredicted RBP23.93■■□□□ 1.42
PSMA4-215ENST00000559934 WLSQ5T9L3 541 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 RUFY4Q6ZNE9 571 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 ZNF571Q7Z3V5 609 aaPredicted RBP23.93■■□□□ 1.42
PSMA4-215ENST00000559934 TXNRD3Q86VQ6 643 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 CACNA2D3Q8IZS8 1091 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.93■■□□□ 1.42
PSMA4-215ENST00000559934 UBA5Q9GZZ9 404 aa23.93■■□□□ 1.42
PSMA4-215ENST00000559934 TMEM266Q2M3C6 531 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 LRRC57Q8N9N7 239 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 MDM1Q8TC05 714 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 UIMC1Q96RL1 719 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 CELF4Q9BZC1 486 aaKnown RBP23.92■■□□□ 1.42
PSMA4-215ENST00000559934 ODF2LQ9ULJ1 636 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 CEP83Q9Y592 693 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 MYH14Q7Z406 1995 aaKnown RBP23.92■■□□□ 1.42
PSMA4-215ENST00000559934 SF3A3Q12874 501 aaKnown RBP eCLIP23.92■■□□□ 1.42
PSMA4-215ENST00000559934 PSMD2Q13200 908 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 FAM26FQ5R3K3 315 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 EIF1ADQ8N9N8 165 aaKnown RBP23.92■■□□□ 1.42
PSMA4-215ENST00000559934 ACTRT1Q8TDG2 376 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 SGSM3Q96HU1 749 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 PANK4Q9NVE7 773 aa23.92■■□□□ 1.42
PSMA4-215ENST00000559934 TMCO5BA8MYB1 307 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 BHMG1C9JSJ3 638 aaPredicted RBP23.91■■□□□ 1.42
PSMA4-215ENST00000559934 PGRMC1O00264 195 aaKnown RBP23.91■■□□□ 1.42
PSMA4-215ENST00000559934 C21orf2O43822 256 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 RASA1P20936 1047 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 SCP2P22307 547 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 E2F5Q15329 346 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 KRT71Q3SY84 523 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 TMEM119Q4V9L6 283 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 KRT79Q5XKE5 535 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 RPAINQ86UA6 219 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 TATDN2Q93075 761 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 PBKQ96KB5 322 aa23.91■■□□□ 1.42
PSMA4-215ENST00000559934 LZTS2Q9BRK4 669 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms