RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 ADAM15Q13444 863 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 KCNV1Q6PIU1 500 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 CLP1Q92989 425 aaKnown RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 ZNF689Q96CS4 500 aaPredicted RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 POP1Q99575 1024 aaKnown RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 GPR20Q99678 358 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 LMAN2LQ9H0V9 348 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 RNF41Q9H4P4 317 aaPredicted RBP18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 ZSWIM5Q9P217 1185 aa18.13■□□□□ 0.49
AC243562.3-201ENST00000559866 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 GLP2RO95838 553 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 RB1P06400 928 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 LPIN1Q14693 890 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 TRIM67Q6ZTA4 783 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 BMP8AQ7Z5Y6 402 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 FCHSD1Q86WN1 690 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 APBB2Q92870 758 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 EHMT1Q9H9B1 1298 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 PCDHGC5Q9Y5F6 944 aa18.12■□□□□ 0.49
AC243562.3-201ENST00000559866 KAT6AQ92794 2004 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 ZNF213O14771 459 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 NCK2O43639 380 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 CCND2P30279 289 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 VCPP55072 806 aaKnown RBP18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 ARHGAP4P98171 946 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 UTP14CQ5TAP6 766 aaKnown RBP18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 IQCA1Q86XH1 822 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 PBXIP1Q96AQ6 731 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 PCDHA1Q9Y5I3 950 aa18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 MRPL42Q9Y6G3 142 aaKnown RBP18.11■□□□□ 0.49
AC243562.3-201ENST00000559866 FRMPD4Q14CM0 1322 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 LOC730098B7Z3J9 87 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 ENPP3O14638 875 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 ZBTB5O15062 677 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 DGKIO75912 1065 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 EYA4O95677 639 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 TGFB3P10600 412 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 NDUFV1P49821 464 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 NT5C2P49902 561 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 RBM10P98175 930 aaKnown RBP18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 HOMER1Q86YM7 354 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 RILPL2Q969X0 211 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 ZBTB10Q96DT7 871 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 PLAGL2Q9UPG8 496 aa18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 BAZ2BQ9UIF8 2168 aaKnown RBP18.1■□□□□ 0.49
AC243562.3-201ENST00000559866 FNDC1Q4ZHG4 1894 aaPredicted RBP18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 NOP56O00567 594 aaKnown RBP18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 ITGB1P05556 798 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 PTPN5P54829 565 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 ZXDAP98168 799 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 SP4Q02446 784 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 BTG3Q14201 252 aaPredicted RBP18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 CCDC178Q5BJE1 867 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 SMRP1Q8NCR6 262 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 INPP4AQ96PE3 977 aaPredicted RBP18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 PIGSQ96S52 555 aa18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 BARX2Q9UMQ3 279 aaPredicted RBP18.09■□□□□ 0.49
AC243562.3-201ENST00000559866 SPATA31C2B4DYI2 1134 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 SDSP20132 328 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 ICAM3P32942 547 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 SEC23AQ15436 765 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 METTL7BQ6UX53 244 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 RTN4RL1Q86UN2 441 aaPredicted RBP18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 AGO3Q9H9G7 860 aaKnown RBP18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 MAP3K20Q9NYL2 800 aaKnown RBP18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 RWDD3Q9Y3V2 267 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 DMDP11532 3685 aa18.08■□□□□ 0.48
AC243562.3-201ENST00000559866 PALM3A6NDB9 673 aaPredicted RBP18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 CYTH3O43739 400 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 ST18O60284 1047 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 GATMP50440 423 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 CBX2Q14781 532 aaPredicted RBP18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 FBXO47Q5MNV8 452 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 CYB5R4Q7L1T6 521 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 VN1R2Q8NFZ6 395 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 SPPL3Q8TCT6 385 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 SENP2Q9HC62 589 aa18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 USP15Q9Y4E8 981 aaPredicted RBP18.07■□□□□ 0.48
AC243562.3-201ENST00000559866 GCOM1H8Y6P7 765 aaPredicted RBP18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 POLR2MP0CAP2 368 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 GNAT1P11488 350 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 NRIP1P48552 1158 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 COASYQ13057 564 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 PAN2Q504Q3 1202 aaKnown RBP18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 MARCH8Q5T0T0 291 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 RBM23Q86U06 439 aaKnown RBP18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 FBXL6Q8N531 539 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 EFHBQ8N7U6 833 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 KLHL23Q8NBE8 558 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 DNAJB3Q8WWF6 145 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 ASIC4Q96FT7 647 aa18.06■□□□□ 0.48
AC243562.3-201ENST00000559866 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms