RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 MTFR1Q15390 333 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 FSCN1Q16658 493 aaKnown RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 CSPP1Q1MSJ5 1256 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 ABHD15Q6UXT9 468 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 IGSF22Q8N9C0 903 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 OR6J1Q8NGC5 347 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 NEK9Q8TD19 979 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 TNPO1Q92973 898 aaKnown RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 ZFP91Q96JP5 570 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-215ENST00000559774 VAV3Q9UKW4 847 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 CLIC4Q9Y696 253 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 SYNRGQ9UMZ2 1314 aa9.79□□□□□ -0.84
LRRC28-215ENST00000559774 IGKV6D-21A0A0A0MT36 114 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 DNM1LO00429 736 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 CTAGE5O15320 804 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 PSAPP07602 524 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 ACTR2P61160 394 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 NBR1Q14596 966 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 STK38Q15208 465 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 EPHA7Q15375 998 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 HSDL1Q3SXM5 330 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 GNASQ5JWF2 1037 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 FOXD4L5Q5VV16 416 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-215ENST00000559774 HAUS3Q68CZ6 603 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 CCSAPQ6IQ19 270 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-215ENST00000559774 MIS18BP1Q6P0N0 1132 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 FAM173BQ6P4H8 233 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 PLPPR4Q7Z2D5 763 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 KRI1Q8N9T8 703 aaKnown RBP9.78□□□□□ -0.84
LRRC28-215ENST00000559774 ERMNQ8TAM6 284 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 AFAP1L1Q8TED9 768 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 U2AF1L4Q8WU68 220 aaKnown RBP9.78□□□□□ -0.84
LRRC28-215ENST00000559774 FOXD4L4Q8WXT5 416 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-215ENST00000559774 COPS5Q92905 334 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 DEFB118Q96PH6 123 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 GPR20Q99678 358 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 KATNAL1Q9BW62 490 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 DISC1Q9NRI5 854 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 EMSYQ7Z589 1322 aa9.78□□□□□ -0.84
LRRC28-215ENST00000559774 GSTTP1A0A1W2PQM5 241 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 POTEFA5A3E0 1075 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 LGR5O75473 907 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 LYPLA2O95372 231 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 CCNE2O96020 404 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 P4HBP07237 508 aaKnown RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 MMP3P08254 477 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 C6orf222P0C671 652 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 SUPT20HL2P0C7V6 817 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 TECP42680 631 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 LRRC41Q15345 812 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 FAM160B1Q5W0V3 765 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 MIER3Q7Z3K6 550 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 AFG1LQ8WV93 481 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 ATP6V0A1Q93050 837 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 SPATA32Q96LK8 384 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 HSD17B14Q9BPX1 270 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 POLR3CQ9BUI4 534 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 UNC45AQ9H3U1 944 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 SMARCAD1Q9H4L7 1026 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 AZI2Q9H6S1 392 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 TFIP11Q9UBB9 837 aaKnown RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 LRWD1Q9UFC0 647 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 FBXO2Q9UK22 296 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 ZNF215Q9UL58 517 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 PPME1Q9Y570 386 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 MAFBQ9Y5Q3 323 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-215ENST00000559774 MYH7BA7E2Y1 1941 aa9.77□□□□□ -0.85
LRRC28-215ENST00000559774 KBTBD13C9JR72 458 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 CUTAO60888 179 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 PGK1P00558 417 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 F2P00734 622 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 TFRCP02786 760 aaKnown RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 XRCC6P12956 609 aaKnown RBP eCLIP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 RPA1P27694 616 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 TCF7P36402 384 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 STAT5BP51692 787 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 PSMC5P62195 406 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 PURAQ00577 322 aaKnown RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 CEBPZQ03701 1054 aaKnown RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 TMEM63BQ5T3F8 832 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 GJC2Q5T442 439 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 ADALQ6DHV7 355 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 LEO1Q8WVC0 666 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 FAM167AQ96KS9 214 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 C16orf70Q9BSU1 422 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 MTG1Q9BT17 334 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-215ENST00000559774 NT5C3AQ9H0P0 336 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 BCAS3Q9H6U6 928 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 ZSWIM4Q9H7M6 989 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 TUFT1Q9NNX1 390 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 ERAP1Q9NZ08 941 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 PHF24Q9UPV7 400 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 SAMM50Q9Y512 469 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 KIAA1217Q5T5P2 1943 aa9.76□□□□□ -0.85
LRRC28-215ENST00000559774 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 H3BRB1 525 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms