RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 APBB2Q92870 758 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 CUL5Q93034 780 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 MRPL38Q96DV4 380 aaKnown RBP15.09■□□□□ 0.01
TPM1-220ENST00000559556 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 TELO2Q9Y4R8 837 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 RBM8AQ9Y5S9 174 aaKnown RBP15.09■□□□□ 0.01
TPM1-220ENST00000559556 TECTAO75443 2155 aa15.09■□□□□ 0.01
TPM1-220ENST00000559556 LEXMQ3ZCV2 418 aa15.08■□□□□ 0
TPM1-220ENST00000559556 EPC2Q52LR7 807 aa15.08■□□□□ 0
TPM1-220ENST00000559556 RPAINQ86UA6 219 aa15.08■□□□□ 0
TPM1-220ENST00000559556 GPRASP2Q96D09 838 aa15.08■□□□□ 0
TPM1-220ENST00000559556 YME1L1Q96TA2 773 aa15.08■□□□□ 0
TPM1-220ENST00000559556 MYL10Q9BUA6 226 aa15.08■□□□□ 0
TPM1-220ENST00000559556 IFIH1Q9BYX4 1025 aaKnown RBP15.08■□□□□ 0
TPM1-220ENST00000559556 EPHX3Q9H6B9 360 aa15.08■□□□□ 0
TPM1-220ENST00000559556 SEC63Q9UGP8 760 aaKnown RBP15.08■□□□□ 0
TPM1-220ENST00000559556 NRCAMQ92823 1304 aa15.08■□□□□ 0
TPM1-220ENST00000559556 KCNA2P16389 499 aa15.07■□□□□ 0
TPM1-220ENST00000559556 ARHGAP4P98171 946 aa15.07■□□□□ 0
TPM1-220ENST00000559556 TIGD5Q53EQ6 642 aa15.07■□□□□ 0
TPM1-220ENST00000559556 CASC1Q6TDU7 716 aa15.07■□□□□ 0
TPM1-220ENST00000559556 NLRX1Q86UT6 975 aa15.07■□□□□ 0
TPM1-220ENST00000559556 KHSRPQ92945 711 aaKnown RBP eCLIP15.07■□□□□ 04e-9■□□□□ 9.5
TPM1-220ENST00000559556 CDHR1Q96JP9 859 aa15.07■□□□□ 0
TPM1-220ENST00000559556 LZTS2Q9BRK4 669 aa15.07■□□□□ 0
TPM1-220ENST00000559556 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
TPM1-220ENST00000559556 H3BNC9 293 aa15.06■□□□□ 0
TPM1-220ENST00000559556 PRC1O43663 620 aa15.06■□□□□ 0
TPM1-220ENST00000559556 UPP2O95045 317 aa15.06■□□□□ 0
TPM1-220ENST00000559556 PLEKHA8P1O95397 391 aa15.06■□□□□ 0
TPM1-220ENST00000559556 KCNA5P22460 613 aa15.06■□□□□ 0
TPM1-220ENST00000559556 TCF7P36402 384 aaPredicted RBP15.06■□□□□ 0
TPM1-220ENST00000559556 GNAQP50148 359 aa15.06■□□□□ 0
TPM1-220ENST00000559556 SP4Q02446 784 aa15.06■□□□□ 0
TPM1-220ENST00000559556 COL19A1Q14993 1142 aa15.06■□□□□ 0
TPM1-220ENST00000559556 PTPROQ16827 1216 aa15.06■□□□□ 0
TPM1-220ENST00000559556 UTP14CQ5TAP6 766 aaKnown RBP15.06■□□□□ 0
TPM1-220ENST00000559556 FAM178BQ8IXR5 827 aa15.06■□□□□ 0
TPM1-220ENST00000559556 SRBD1Q8N5C6 995 aaKnown RBP15.06■□□□□ 0
TPM1-220ENST00000559556 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.06■□□□□ 0
TPM1-220ENST00000559556 TMEM87BQ96K49 555 aa15.06■□□□□ 0
TPM1-220ENST00000559556 CD320Q9NPF0 282 aa15.06■□□□□ 0
TPM1-220ENST00000559556 SH2B2O14492 632 aaPredicted RBP15.05■□□□□ -0
TPM1-220ENST00000559556 CHRNA1P02708 482 aa15.05■□□□□ -0
TPM1-220ENST00000559556 MCM5P33992 734 aa15.05■□□□□ -0
TPM1-220ENST00000559556 LIFRP42702 1097 aa15.05■□□□□ -0
TPM1-220ENST00000559556 MGAT3Q09327 533 aa15.05■□□□□ -0
TPM1-220ENST00000559556 TAF2Q6P1X5 1199 aa15.05■□□□□ -0
TPM1-220ENST00000559556 TMEM192Q8IY95 271 aa15.05■□□□□ -0
TPM1-220ENST00000559556 TMTC2Q8N394 836 aa15.05■□□□□ -0
TPM1-220ENST00000559556 EHMT1Q9H9B1 1298 aa15.05■□□□□ -0
TPM1-220ENST00000559556 RC3H2Q9HBD1 1191 aaKnown RBP15.05■□□□□ -0
TPM1-220ENST00000559556 C11orf16Q9NQ32 467 aa15.05■□□□□ -0
TPM1-220ENST00000559556 ARIH1Q9Y4X5 557 aaPredicted RBP15.05■□□□□ -0
TPM1-220ENST00000559556 SUPT16HQ9Y5B9 1047 aaKnown RBP15.05■□□□□ -0
TPM1-220ENST00000559556 KMT2EQ8IZD2 1858 aa15.05■□□□□ -0
TPM1-220ENST00000559556 ADGRA3Q8IWK6 1321 aa15.04■□□□□ -0
TPM1-220ENST00000559556 GSTTP1A0A1W2PQM5 241 aa15.04■□□□□ -0
TPM1-220ENST00000559556 MBLAC1A4D2B0 266 aaPredicted RBP15.04■□□□□ -0
TPM1-220ENST00000559556 CCDC69A6NI79 296 aa15.04■□□□□ -0
TPM1-220ENST00000559556 GPR37L1O60883 481 aa15.04■□□□□ -0
TPM1-220ENST00000559556 ATP9AO75110 1047 aa15.04■□□□□ -0
TPM1-220ENST00000559556 CALM1P0DP23 149 aa15.04■□□□□ -0
TPM1-220ENST00000559556 CALM2P0DP24 149 aa15.04■□□□□ -0
TPM1-220ENST00000559556 CALM3P0DP25 149 aa15.04■□□□□ -0
TPM1-220ENST00000559556 ITGB5P18084 799 aa15.04■□□□□ -0
TPM1-220ENST00000559556 PPFIA1Q13136 1202 aa15.04■□□□□ -0
TPM1-220ENST00000559556 GPM6BQ13491 265 aa15.04■□□□□ -0
TPM1-220ENST00000559556 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
TPM1-220ENST00000559556 TMEM31Q5JXX7 168 aa15.04■□□□□ -0
TPM1-220ENST00000559556 RUFY4Q6ZNE9 571 aa15.04■□□□□ -0
TPM1-220ENST00000559556 BANK1Q8NDB2 785 aa15.04■□□□□ -0
TPM1-220ENST00000559556 NEK9Q8TD19 979 aa15.04■□□□□ -0
TPM1-220ENST00000559556 FAM122AQ96E09 287 aa15.04■□□□□ -0
TPM1-220ENST00000559556 LSG1Q9H089 658 aaKnown RBP15.04■□□□□ -0
TPM1-220ENST00000559556 PSTPIP2Q9H939 334 aa15.04■□□□□ -0
TPM1-220ENST00000559556 ERAP1Q9NZ08 941 aa15.04■□□□□ -0
TPM1-220ENST00000559556 TUBE1Q9UJT0 475 aa15.04■□□□□ -0
TPM1-220ENST00000559556 UBIAD1Q9Y5Z9 338 aa15.04■□□□□ -0
TPM1-220ENST00000559556 CACNA1HO95180 2353 aa15.03■□□□□ -0
TPM1-220ENST00000559556 GRXCR2A6NFK2 248 aa15.03■□□□□ -0
TPM1-220ENST00000559556 C5orf67F2Z3F1 127 aa15.03■□□□□ -0
TPM1-220ENST00000559556 PI4K2BG5E9Z4 385 aa15.03■□□□□ -0
TPM1-220ENST00000559556 LINC00271P0C7V0 271 aa15.03■□□□□ -0
TPM1-220ENST00000559556 GHRP10912 638 aa15.03■□□□□ -0
TPM1-220ENST00000559556 RXRAP19793 462 aa15.03■□□□□ -0
TPM1-220ENST00000559556 MTMR1Q13613 665 aa15.03■□□□□ -0
TPM1-220ENST00000559556 LPIN1Q14693 890 aa15.03■□□□□ -0
TPM1-220ENST00000559556 GRIK4Q16099 956 aa15.03■□□□□ -0
TPM1-220ENST00000559556 PTCRAQ6ISU1 281 aaPredicted RBP15.03■□□□□ -0
TPM1-220ENST00000559556 NFXL1Q6ZNB6 911 aa15.03■□□□□ -0
TPM1-220ENST00000559556 CMTR1Q8N1G2 835 aaKnown RBP15.03■□□□□ -0
TPM1-220ENST00000559556 SEPT1Q8WYJ6 367 aa15.03■□□□□ -0
TPM1-220ENST00000559556 PABPC5Q96DU9 382 aaKnown RBP15.03■□□□□ -0
TPM1-220ENST00000559556 NSUN3Q9H649 340 aaKnown RBP15.03■□□□□ -0
TPM1-220ENST00000559556 HCN4Q9Y3Q4 1203 aa15.03■□□□□ -0
TPM1-220ENST00000559556 WDR87Q6ZQQ6 2873 aa15.03■□□□□ -0
TPM1-220ENST00000559556 SPDYE3A6NKU9 549 aa15.02■□□□□ -0
TPM1-220ENST00000559556 MAFGO15525 162 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms