RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TCF7P36402 384 aaPredicted RBP12.97□□□□□ -0.33
SNX1-204ENST00000559061 TLE2Q04725 743 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 ITGA7Q13683 1181 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 DGKDQ16760 1214 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 C7orf61Q8IZ16 206 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 GLT1D1Q96MS3 346 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 PDLIM7Q9NR12 457 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 MTMR6Q9Y217 621 aa12.97□□□□□ -0.33
SNX1-204ENST00000559061 EMSYQ7Z589 1322 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 EML1O00423 815 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 B4GALT4O60513 344 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 CCNT1O60563 726 aaKnown RBP12.96□□□□□ -0.33
SNX1-204ENST00000559061 CABYRO75952 493 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 GCFC2P16383 781 aaKnown RBP12.96□□□□□ -0.33
SNX1-204ENST00000559061 PSEN2P49810 448 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 RESTQ13127 1097 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 PKP1Q13835 747 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 MFSD10Q14728 455 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 UGCGQ16739 394 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 SESTD1Q86VW0 696 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 CCDC60Q8IWA6 550 aaPredicted RBP12.96□□□□□ -0.33
SNX1-204ENST00000559061 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.33
SNX1-204ENST00000559061 WNT8BQ93098 351 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 TRIM43Q96BQ3 446 aaPredicted RBP12.96□□□□□ -0.33
SNX1-204ENST00000559061 TRPV6Q9H1D0 765 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 RNPEPQ9H4A4 650 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 TRMT13Q9NUP7 481 aaKnown RBP12.96□□□□□ -0.33
SNX1-204ENST00000559061 TBX21Q9UL17 535 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 ATP11BQ9Y2G3 1177 aa12.96□□□□□ -0.33
SNX1-204ENST00000559061 MYH9P35579 1960 aaKnown RBP12.96□□□□□ -0.34
SNX1-204ENST00000559061 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 ZEB2O60315 1214 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 KPNA6O60684 536 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 PQBP1O60828 265 aaKnown RBP12.95□□□□□ -0.34
SNX1-204ENST00000559061 STBD1O95210 358 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 SUPT20HL2P0C7V6 817 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 ADAM17P78536 824 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
SNX1-204ENST00000559061 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 UTP14CQ5TAP6 766 aaKnown RBP12.95□□□□□ -0.34
SNX1-204ENST00000559061 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
SNX1-204ENST00000559061 GDF6Q6KF10 455 aaPredicted RBP12.95□□□□□ -0.34
SNX1-204ENST00000559061 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 DHX38Q92620 1227 aaKnown RBP12.95□□□□□ -0.34
SNX1-204ENST00000559061 VWCEQ96DN2 955 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 RIT2Q99578 217 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 SDF4Q9BRK5 362 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 HTATIP2Q9BUP3 242 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 HDAC6Q9UBN7 1215 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 SCN5AQ14524 2016 aa12.95□□□□□ -0.34
SNX1-204ENST00000559061 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 IGSF9BQ9UPX0 1349 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 H0YGN5 161 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 H3BRB1 525 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 NOP56O00567 594 aaKnown RBP12.94□□□□□ -0.34
SNX1-204ENST00000559061 ZNF862O60290 1169 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 SYN1P17600 705 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 SAFBQ15424 915 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX1-204ENST00000559061 ZNF174Q15697 407 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 IL17AQ16552 155 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 TTC38Q5R3I4 469 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 LRCH2Q5VUJ6 765 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
SNX1-204ENST00000559061 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 AFAP1L1Q8TED9 768 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 ZBTB10Q96DT7 871 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
SNX1-204ENST00000559061 TBC1D22BQ9NU19 505 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
SNX1-204ENST00000559061 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
SNX1-204ENST00000559061 ZMYND8Q9ULU4 1186 aaPredicted RBP12.94□□□□□ -0.34
SNX1-204ENST00000559061 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 TBX3O15119 743 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 NEMFO60524 1076 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 GAS7O60861 476 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 SMIM10L2AP0DMW4 78 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 SMIM10L2BP0DMW5 78 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 MARK3P27448 753 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 MCM7P33993 719 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 KRT76Q01546 638 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 PPP2R5CQ13362 524 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 PLCB4Q15147 1175 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 TRIM71Q2Q1W2 868 aaKnown RBP12.93□□□□□ -0.34
SNX1-204ENST00000559061 BRDTQ58F21 947 aaPredicted RBP12.93□□□□□ -0.34
SNX1-204ENST00000559061 MARCH8Q5T0T0 291 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 FAM173BQ6P4H8 233 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 FERMT3Q86UX7 667 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms