RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 ITGB1P05556 798 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 HSPD1P10809 573 aaKnown RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 PCP11498 1178 aaKnown RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 AVPR2P30518 371 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 ICAM3P32942 547 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 NDUFV1P49821 464 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 NUBP1P53384 320 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 SEMA3FQ13275 785 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 PGM5Q15124 567 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 PTPN21Q16825 1174 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 RRP12Q5JTH9 1297 aaKnown RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 C20orf194Q5TEA3 1177 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 ARHGEF16Q5VV41 709 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 KCNV1Q6PIU1 500 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 ASCL5Q7RTU5 278 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 ZNF589Q86UQ0 364 aaPredicted RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 VSIG10LQ86VR7 867 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 TRIM50Q86XT4 487 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 MIER1Q8N108 512 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 LMBR1Q8WVP7 490 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 MTMR8Q96EF0 704 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 PHF7Q9BWX1 381 aaPredicted RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 TUT1Q9H6E5 874 aaKnown RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 BCAS3Q9H6U6 928 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 BARX2Q9UMQ3 279 aaPredicted RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 PLAGL2Q9UPG8 496 aa8.74□□□□□ -1.01
HMG20A-207ENST00000559035 MRPL42Q9Y6G3 142 aaKnown RBP8.74□□□□□ -1.01
HMG20A-207ENST00000559035 PRR23AA6NEV1 266 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 SORBS3O60504 671 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 CHRNA1P02708 482 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 TGFB3P10600 412 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 GHRP10912 638 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 ATF7P17544 494 aaPredicted RBP8.73□□□□□ -1.01
HMG20A-207ENST00000559035 NBL1P41271 181 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 LPIN1Q14693 890 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 ASPRV1Q53RT3 343 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 NAALADL2Q58DX5 795 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 DGKHQ86XP1 1220 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 CMTR2Q8IYT2 770 aaKnown RBP8.73□□□□□ -1.01
HMG20A-207ENST00000559035 PNMA1Q8ND90 353 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 VN1R2Q8NFZ6 395 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 SPPL3Q8TCT6 385 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 ATP8B4Q8TF62 1192 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 INPP4AQ96PE3 977 aaPredicted RBP8.73□□□□□ -1.01
HMG20A-207ENST00000559035 GPR20Q99678 358 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 IRF2BPLQ9H1B7 796 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 JMJD4Q9H9V9 463 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 HELLSQ9NRZ9 838 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 TOMM22Q9NS69 142 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 SETD4Q9NVD3 440 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 MRPL11Q9Y3B7 192 aaKnown RBP8.73□□□□□ -1.01
HMG20A-207ENST00000559035 TELO2Q9Y4R8 837 aa8.73□□□□□ -1.01
HMG20A-207ENST00000559035 SUPT16HQ9Y5B9 1047 aaKnown RBP8.73□□□□□ -1.01
HMG20A-207ENST00000559035 GALR2O43603 387 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-207ENST00000559035 CFBP00751 764 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 PDGFBP01127 241 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-207ENST00000559035 MX1P20591 662 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 NT5C2P49902 561 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 HAND2P61296 217 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 KCNC3Q14003 757 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 BTG3Q14201 252 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-207ENST00000559035 SLC35G1Q2M3R5 365 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 FBXO47Q5MNV8 452 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 METTL7BQ6UX53 244 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 ERMP1Q7Z2K6 904 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 FAM227BQ96M60 508 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 IGFLR1Q9H665 355 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 MAP3K20Q9NYL2 800 aaKnown RBP8.72□□□□□ -1.01
HMG20A-207ENST00000559035 PCDHGC5Q9Y5F6 944 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 OTOGLQ3ZCN5 2332 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 TPRP12270 2363 aaKnown RBP8.72□□□□□ -1.01
HMG20A-207ENST00000559035 ACACBO00763 2458 aa8.72□□□□□ -1.01
HMG20A-207ENST00000559035 MBLAC1A4D2B0 266 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-207ENST00000559035 ENPP3O14638 875 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 CSPG5O95196 566 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 GNAT1P11488 350 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 NRIP1P48552 1158 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 MRPS9P82933 396 aaKnown RBP8.71□□□□□ -1.02
HMG20A-207ENST00000559035 RBM10P98175 930 aaKnown RBP8.71□□□□□ -1.02
HMG20A-207ENST00000559035 TSHZ1Q6ZSZ6 1077 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 SAMD3Q8N6K7 520 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 ENAHQ8N8S7 591 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-207ENST00000559035 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 POF1BQ8WVV4 589 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 ATOH1Q92858 354 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-207ENST00000559035 PPP2R3CQ969Q6 453 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 ZKSCAN3Q9BRR0 538 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 USP26Q9BXU7 913 aa8.71□□□□□ -1.02
HMG20A-207ENST00000559035 FNDC1Q4ZHG4 1894 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-207ENST00000559035 LOXHD1Q8IVV2 1947 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 H0Y858 1186 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 FSCN2O14926 492 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 MYCLP12524 364 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-207ENST00000559035 CCND2P30279 289 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 HOXA13P31271 388 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-207ENST00000559035 ARHGAP4P98171 946 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 DUSP6Q16828 381 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 MCMDC2Q4G0Z9 681 aa8.7□□□□□ -1.02
HMG20A-207ENST00000559035 TAF2Q6P1X5 1199 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms