RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PANK4Q9NVE7 773 aa13.33□□□□□ -0.27
SEC11A-206ENST00000558924 LGALS16A8MUM7 142 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 BBOX1O75936 387 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.28
SEC11A-206ENST00000558924 USP8P40818 1118 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 CARSP49589 748 aaKnown RBP13.33□□□□□ -0.28
SEC11A-206ENST00000558924 KIF11P52732 1056 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 CABS1Q96KC9 395 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 PLCD4Q9BRC7 762 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 ZC3H4Q9UPT8 1303 aaKnown RBP13.33□□□□□ -0.28
SEC11A-206ENST00000558924 LRRC53A6NM62 1247 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 ICA1Q05084 483 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 IRF2BP1Q8IU81 584 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 PCDHA13Q9Y5I0 950 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 MYH6P13533 1939 aa13.33□□□□□ -0.28
SEC11A-206ENST00000558924 GPR75-ASB3A0A0A6YYF3 556 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 TMEM110-MUSTN1A8MSY1 372 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 OPA1O60313 960 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 SPATA4Q8NEY3 305 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 RBM12Q9NTZ6 932 aaKnown RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 FAM26FQ5R3K3 315 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 CDC42EP5Q6NZY7 148 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 ZMYND12Q9H0C1 365 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 JMJD4Q9H9V9 463 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 EME2A4GXA9 379 aaPredicted RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 EPHB6O15197 1021 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 NF2P35240 595 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 RHBDL3P58872 404 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 ADCY1Q08828 1119 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 QRICH1Q2TAL8 776 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 CCNI2Q6ZMN8 369 aaPredicted RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 APTXQ7Z2E3 356 aaKnown RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 C4orf32Q8N8J7 132 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 SPATA20Q8TB22 786 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 SELENOSQ9BQE4 189 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 LSM14BQ9BX40 385 aaKnown RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 NDST4Q9H3R1 872 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 LIMA1Q9UHB6 759 aaKnown RBP13.32□□□□□ -0.28
SEC11A-206ENST00000558924 DOT1LQ8TEK3 1739 aa13.32□□□□□ -0.28
SEC11A-206ENST00000558924 GH2P01242 217 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 HSPA1LP34931 641 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 AOC3Q16853 763 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 MYOCDQ8IZQ8 938 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 TBC1D5Q92609 795 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 TBC1D31Q96DN5 1066 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 LZTS2Q9BRK4 669 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 TCEAL9Q9UHQ7 104 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 STRCQ7RTU9 1775 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 ABCB4P21439 1286 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 TRIM14Q14142 442 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 ARMC3Q5W041 872 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
SEC11A-206ENST00000558924 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 TSEN2Q8NCE0 465 aaKnown RBP13.31□□□□□ -0.28
SEC11A-206ENST00000558924 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
SEC11A-206ENST00000558924 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.31□□□□□ -0.28
SEC11A-206ENST00000558924 UPP2O95045 317 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 CRKP46108 304 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 CCNHP51946 323 aaPredicted RBP13.31□□□□□ -0.28
SEC11A-206ENST00000558924 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
SEC11A-206ENST00000558924 WDR59Q6PJI9 974 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 KIAA0895Q8NCT3 520 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 CYP2W1Q8TAV3 490 aa13.31□□□□□ -0.28
SEC11A-206ENST00000558924 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
SEC11A-206ENST00000558924 FAM153BP0C7A2 387 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 GRB10Q13322 594 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 FAM153CQ494X1 144 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 GIMAP8Q8ND71 665 aaPredicted RBP13.3□□□□□ -0.28
SEC11A-206ENST00000558924 OSBPL9Q96SU4 736 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 FAM153AQ9UHL3 310 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 ABCC6O95255 1503 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 GCNT3O95395 438 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 EEF1GP26641 437 aaKnown RBP13.3□□□□□ -0.28
SEC11A-206ENST00000558924 FNTAP49354 379 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 SPRED3Q2MJR0 410 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 NBPF9Q3BBW0 867 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 TTI2Q6NXR4 508 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 CPLX4Q7Z7G2 160 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 TRIM58Q8NG06 486 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 NOX5Q96PH1 765 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 CSRNP1Q96S65 589 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 DUSP9Q99956 384 aaKnown RBP13.3□□□□□ -0.28
SEC11A-206ENST00000558924 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
SEC11A-206ENST00000558924 FAM184BQ9ULE4 1060 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms