RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CDC25AP30304 524 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 CCT6AP40227 531 aaKnown RBP16.69■□□□□ 0.26
VPS18-202ENST00000558474 KARSQ15046 597 aaKnown RBP16.69■□□□□ 0.26
VPS18-202ENST00000558474 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 TMEM119Q4V9L6 283 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 METTL7BQ6UX53 244 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
VPS18-202ENST00000558474 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
VPS18-202ENST00000558474 EIF2AK1Q9BQI3 630 aaKnown RBP16.69■□□□□ 0.26
VPS18-202ENST00000558474 ARHGAP39Q9C0H5 1083 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 LRRC27Q9C0I9 530 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 WBP1LQ9NX94 342 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 SRRDQ9UH36 339 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 PCDHA10Q9Y5I2 948 aa16.69■□□□□ 0.26
VPS18-202ENST00000558474 EML1O00423 815 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 ACTN4O43707 911 aaKnown RBP16.68■□□□□ 0.26
VPS18-202ENST00000558474 ATG7O95352 703 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
VPS18-202ENST00000558474 STAT6P42226 847 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 FLT3LGP49771 235 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 SP2Q02086 613 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 GRB10Q13322 594 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 LONRF3Q496Y0 759 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 CELF3Q5SZQ8 465 aaKnown RBP16.68■□□□□ 0.26
VPS18-202ENST00000558474 RBM43Q6ZSC3 357 aaKnown RBP16.68■□□□□ 0.26
VPS18-202ENST00000558474 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 CATSPER3Q86XQ3 398 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 DNAJC5GQ8N7S2 189 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 PDILTQ8N807 584 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
VPS18-202ENST00000558474 WDR81Q562E7 1941 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 A0A087X0B3 334 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 FARP2O94887 1054 aaPredicted RBP16.67■□□□□ 0.26
VPS18-202ENST00000558474 LYPLA2O95372 231 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 PSAPP07602 524 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 SPATA31C1P0DKV0 1188 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
VPS18-202ENST00000558474 PLCG1P19174 1290 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 LAMC2Q13753 1193 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 DUSP28Q4G0W2 176 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 MFSD14CQ5VZR4 134 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 PDXDC2PQ6P474 469 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 CYFIP1Q7L576 1253 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 PXYLP1Q8TE99 480 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 DHX58Q96C10 678 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 PNMA5Q96PV4 448 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 ZSWIM4Q9H7M6 989 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 MLXIPQ9HAP2 919 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 FLRT1Q9NZU1 646 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 SERTAD1Q9UHV2 236 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 GABRQQ9UN88 632 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 Q9Y3F1 56 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
VPS18-202ENST00000558474 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
VPS18-202ENST00000558474 CHMP2AO43633 222 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 MED24O75448 989 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 SLITRK3O94933 977 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 GGPS1O95749 300 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 CCNE2O96020 404 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 GH1P01241 217 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 ZNF865P0CJ78 1059 aaPredicted RBP16.66■□□□□ 0.26
VPS18-202ENST00000558474 QARSP47897 775 aaKnown RBP16.66■□□□□ 0.26
VPS18-202ENST00000558474 ACTR2P61160 394 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 AMPD3Q01432 767 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 PRKCZQ05513 592 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 NAALADL2Q58DX5 795 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 ABHD15Q6UXT9 468 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 SH3RF1Q7Z6J0 888 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
VPS18-202ENST00000558474 ZNF296Q8WUU4 475 aaPredicted RBP16.66■□□□□ 0.26
VPS18-202ENST00000558474 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 KBTBD4Q9NVX7 518 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 DNM3Q9UQ16 869 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 SAMM50Q9Y512 469 aa16.66■□□□□ 0.26
VPS18-202ENST00000558474 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 ARIH2O95376 493 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 PSMC5P62195 406 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 CCL14Q16627 93 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 C4orf19Q8IY42 314 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 LARP4BQ92615 738 aaKnown RBP16.65■□□□□ 0.26
VPS18-202ENST00000558474 RAD54LQ92698 747 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 NACC1Q96RE7 527 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 PDGFCQ9NRA1 345 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
VPS18-202ENST00000558474 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
VPS18-202ENST00000558474 POTEB3A0JP26 581 aa16.64■□□□□ 0.25
VPS18-202ENST00000558474 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.25
VPS18-202ENST00000558474 MDM2Q00987 491 aaPredicted RBP16.64■□□□□ 0.25
VPS18-202ENST00000558474 CCDC144BQ3MJ40 725 aa16.64■□□□□ 0.25
VPS18-202ENST00000558474 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms