RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TBC1D22AQ8WUA7 517 aa7.56□□□□□ -1.2
ZEB1-211ENST00000558440 ZKSCAN4Q969J2 545 aaPredicted RBP7.56□□□□□ -1.2
ZEB1-211ENST00000558440 TEKT1Q969V4 418 aa7.56□□□□□ -1.2
ZEB1-211ENST00000558440 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
ZEB1-211ENST00000558440 C12orf49Q9H741 205 aa7.56□□□□□ -1.2
ZEB1-211ENST00000558440 PRKRIP1Q9H875 184 aaPredicted RBP7.56□□□□□ -1.2
ZEB1-211ENST00000558440 SRRDQ9UH36 339 aa7.56□□□□□ -1.2
ZEB1-211ENST00000558440 NR2E3Q9Y5X4 410 aa7.56□□□□□ -1.2
ZEB1-211ENST00000558440 ARID1BQ8NFD5 2236 aaPredicted RBP7.56□□□□□ -1.2
ZEB1-211ENST00000558440 MYPNQ86TC9 1320 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 GRM8O00222 908 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 LEFTY1O75610 366 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 GJA8P48165 433 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 CACNB3P54284 484 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 UBXN2AP68543 259 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 HDLBPQ00341 1268 aaKnown RBP7.55□□□□□ -1.2
ZEB1-211ENST00000558440 PPATQ06203 517 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 COL19A1Q14993 1142 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 FAM83AQ86UY5 434 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 STK11IPQ8N1F8 1099 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 BCL7CQ8WUZ0 217 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-211ENST00000558440 FAM84BQ96KN1 310 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-211ENST00000558440 DUSP23Q9BVJ7 150 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 ZNF341Q9BYN7 854 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 C9orf78Q9NZ63 289 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-211ENST00000558440 FAM8A1Q9UBU6 413 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 CPA4Q9UI42 421 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 SLC5A6Q9Y289 635 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 RIPOR2Q9Y4F9 1068 aa7.55□□□□□ -1.2
ZEB1-211ENST00000558440 MAST3O60307 1309 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 IL16Q14005 1332 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 F6X3S4 739 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 PDHXO00330 501 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 GJB1P08034 283 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 USP17L7P0C7H9 530 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 CCL5P13501 91 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 LRRC14Q15048 493 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 EPHA10Q5JZY3 1008 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 BEND3Q5T5X7 828 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 RASIP1Q5U651 963 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 FKBP1CQ5VVH2 108 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 LLGL2Q6P1M3 1020 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 ANKRD23Q86SG2 305 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 WFDC3Q8IUB2 231 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
ZEB1-211ENST00000558440 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
ZEB1-211ENST00000558440 FAM181AQ8N9Y4 354 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 MISP3Q96FF7 219 aa7.54□□□□□ -1.2
ZEB1-211ENST00000558440 SSU72Q9NP77 194 aaKnown RBP7.54□□□□□ -1.2
ZEB1-211ENST00000558440 RPAP1Q9BWH6 1393 aaPredicted RBP7.54□□□□□ -1.2
ZEB1-211ENST00000558440 FANCIQ9NVI1 1328 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 DOCK1Q14185 1865 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 PHIPQ8WWQ0 1821 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 FARP2O94887 1054 aaPredicted RBP7.53□□□□□ -1.2
ZEB1-211ENST00000558440 LDHBP07195 334 aaKnown RBP7.53□□□□□ -1.2
ZEB1-211ENST00000558440 CTGFP29279 349 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 NTF4P34130 210 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 RING1Q06587 406 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 PPM1JQ5JR12 505 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 MIGA2Q7L4E1 593 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 FBXO33Q7Z6M2 555 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 PLD6Q8N2A8 252 aaKnown RBP7.53□□□□□ -1.2
ZEB1-211ENST00000558440 NETO1Q8TDF5 533 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 ZDHHC15Q96MV8 337 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 FRMD6Q96NE9 622 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 PARK7Q99497 189 aaKnown RBP7.53□□□□□ -1.2
ZEB1-211ENST00000558440 PUS3Q9BZE2 481 aaKnown RBP7.53□□□□□ -1.2
ZEB1-211ENST00000558440 MKNK2Q9HBH9 465 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 CYP8B1Q9UNU6 501 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 U3KQE9 123 aa7.53□□□□□ -1.2
ZEB1-211ENST00000558440 ATAD5Q96QE3 1844 aa7.52□□□□□ -1.2
ZEB1-211ENST00000558440 A0A1W2PPC1 479 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 VAMP4O75379 141 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 ALDH1L1O75891 902 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 CELA3AP09093 270 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 PRKCZQ05513 592 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 METTL24Q5JXM2 366 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 SLC4A10Q6U841 1118 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 HHIPL2Q6UWX4 724 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 ZNF574Q6ZN55 896 aaPredicted RBP7.52□□□□□ -1.21
ZEB1-211ENST00000558440 UBE2Q1Q7Z7E8 422 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 TOP6BLQ8N6T0 577 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 U2AF1L4Q8WU68 220 aaKnown RBP7.52□□□□□ -1.21
ZEB1-211ENST00000558440 MRIQ9BWK5 157 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 PRO3102Q9H379 93 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 SUGT1Q9Y2Z0 365 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 ADGRA2Q96PE1 1338 aa7.52□□□□□ -1.21
ZEB1-211ENST00000558440 DCDC2CA8MYV0 355 aa7.51□□□□□ -1.21
ZEB1-211ENST00000558440 ADCY3O60266 1144 aa7.51□□□□□ -1.21
ZEB1-211ENST00000558440 SGPL1O95470 568 aa7.51□□□□□ -1.21
ZEB1-211ENST00000558440 TFRCP02786 760 aaKnown RBP7.51□□□□□ -1.21
ZEB1-211ENST00000558440 CAPN2P17655 700 aa7.51□□□□□ -1.21
ZEB1-211ENST00000558440 ZEB1P37275 1124 aaPredicted RBP7.51□□□□□ -1.21
ZEB1-211ENST00000558440 EXOSC9Q06265 439 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms