RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 RRP9O43818 475 aaKnown RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 ZNF286BP0CG31 522 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 TGFB3P10600 412 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 HOXD8P13378 290 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 FOXD4L6Q3SYB3 417 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 WWC2Q6AWC2 1192 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 PSRC1Q6PGN9 363 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 FOXD4L3Q6VB84 417 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 HEATR3Q7Z4Q2 680 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 CTAGE1Q96RT6 745 aa11.69□□□□□ -0.54
TPM1-212ENST00000558347 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 ORC3Q9UBD5 711 aaPredicted RBP11.69□□□□□ -0.54
TPM1-212ENST00000558347 HAS3O00219 553 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 F2P00734 622 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
TPM1-212ENST00000558347 TPM3P06753 285 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 ICAM3P32942 547 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 PSEN2P49810 448 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 SSRP1Q08945 709 aaKnown RBP11.68□□□□□ -0.54
TPM1-212ENST00000558347 ZNF697Q5TEC3 545 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 PCNX4Q63HM2 1172 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
TPM1-212ENST00000558347 SESTD1Q86VW0 696 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 SPATA33Q96N06 139 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 ALG1Q9BT22 464 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 RNF26Q9BY78 433 aaPredicted RBP11.68□□□□□ -0.54
TPM1-212ENST00000558347 PSTPIP2Q9H939 334 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 CXXC1Q9P0U4 656 aaPredicted RBP11.68□□□□□ -0.54
TPM1-212ENST00000558347 TELO2Q9Y4R8 837 aa11.68□□□□□ -0.54
TPM1-212ENST00000558347 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.67□□□□□ -0.54
TPM1-212ENST00000558347 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
TPM1-212ENST00000558347 GRXCR1A8MXD5 290 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 SPATA31C2B4DYI2 1134 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 STAM2O75886 525 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 FGBP02675 491 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 MFSD10Q14728 455 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 PTGISQ16647 500 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 KIAA0753Q2KHM9 967 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 GNPTABQ3T906 1256 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 HERVK_113Q902F9 699 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 DHX38Q92620 1227 aaKnown RBP11.67□□□□□ -0.54
TPM1-212ENST00000558347 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 MLXIPQ9HAP2 919 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 HDAC6Q9UBN7 1215 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 GTF2IRD1Q9UHL9 959 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 NOD1Q9Y239 953 aa11.67□□□□□ -0.54
TPM1-212ENST00000558347 TRIP12Q14669 1992 aaPredicted RBP11.66□□□□□ -0.54
TPM1-212ENST00000558347 RBAK-RBAKDNI3L0D1 243 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 PRPF3O43395 683 aaKnown RBP11.66□□□□□ -0.54
TPM1-212ENST00000558347 PPFIA4O75335 1185 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 DEXIO95424 95 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 CCDC192P0DO97 292 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 HIC1Q14526 733 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 XRRA1Q6P2D8 792 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 OTOP2Q7RTS6 562 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 DEFB128Q7Z7B8 93 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 WASF1Q92558 559 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 KATNAL1Q9BW62 490 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 ZSCAN16Q9H4T2 348 aaPredicted RBP11.66□□□□□ -0.54
TPM1-212ENST00000558347 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
TPM1-212ENST00000558347 PCDHA6Q9UN73 950 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 PCDHA8Q9Y5H6 950 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
TPM1-212ENST00000558347 UNC80Q8N2C7 3258 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 GBF1Q92538 1859 aa11.66□□□□□ -0.54
TPM1-212ENST00000558347 STXBP3O00186 592 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 DTNBO60941 627 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 LGALS2P05162 132 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 IQCF3P0C7M6 154 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 DNAJB2P25686 324 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 PBX2P40425 430 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 NAPAP54920 295 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 ZNF200P98182 395 aaPredicted RBP11.65□□□□□ -0.54
TPM1-212ENST00000558347 NEDD9Q14511 834 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 METTL7BQ6UX53 244 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 RPUSD2Q8IZ73 545 aaKnown RBP11.65□□□□□ -0.54
TPM1-212ENST00000558347 C7orf31Q8N865 590 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 PHKBQ93100 1093 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 CDX2Q99626 313 aaPredicted RBP11.65□□□□□ -0.54
TPM1-212ENST00000558347 GPR20Q99678 358 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 SLC26A6Q9BXS9 759 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 PBX4Q9BYU1 374 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 USP25Q9UHP3 1055 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 CHD7Q9P2D1 2997 aa11.65□□□□□ -0.54
TPM1-212ENST00000558347 SPDYE3A6NKU9 549 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 ATP9AO75110 1047 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 ADCY5O95622 1261 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 ITGB5P18084 799 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms