RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ITGB5P18084 799 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 KCNQ1P51787 676 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 IGBP1P78318 339 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 RTN1Q16799 776 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 WWC2Q6AWC2 1192 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 LMBR1Q8WVP7 490 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 GPRASP2Q96D09 838 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 CDHR1Q96JP9 859 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 NECAB3Q96P71 396 aaPredicted RBP17.81■□□□□ 0.44
TPM1-211ENST00000558314 TGS1Q96RS0 853 aaKnown RBP17.81■□□□□ 0.44
TPM1-211ENST00000558314 SENP7Q9BQF6 1050 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 OSBPL7Q9BZF2 842 aa17.81■□□□□ 0.44
TPM1-211ENST00000558314 PRRC2BQ5JSZ5 2229 aaKnown RBP17.81■□□□□ 0.44
TPM1-211ENST00000558314 PTPRSQ13332 1948 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 TTC28Q96AY4 2481 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 KLF18A0A0U1RQI7 1052 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 LINC01553A4QN01 128 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 CDC45O75419 566 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 KCNA2P16389 499 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 PPFIA1Q13136 1202 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 ADCK5Q3MIX3 580 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 APOA5Q6Q788 366 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 RASEFQ8IZ41 740 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 RBM28Q9NW13 759 aaKnown RBP17.8■□□□□ 0.44
TPM1-211ENST00000558314 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
TPM1-211ENST00000558314 V9GY48 417 aaPredicted RBP17.8■□□□□ 0.44
TPM1-211ENST00000558314 CNTNAP5Q8WYK1 1306 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 CPA1P15085 419 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 AAK1Q2M2I8 961 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 PLEKHG4Q58EX7 1191 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 RUFY4Q6ZNE9 571 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 DHX32Q7L7V1 743 aaKnown RBP17.79■□□□□ 0.44
TPM1-211ENST00000558314 SGMS1Q86VZ5 419 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 YME1L1Q96TA2 773 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 C17orf80Q9BSJ5 609 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 INSL6Q9Y581 213 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 UBIAD1Q9Y5Z9 338 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
TPM1-211ENST00000558314 NRCAMQ92823 1304 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 GSTTP1A0A1W2PQM5 241 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 LPXNO60711 386 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 GHRP10912 638 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 HOXC8P31273 242 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 ADCY7P51828 1080 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 GRIK4Q16099 956 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 FBXO22Q8NEZ5 403 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 ZBTB10Q96DT7 871 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 UIMC1Q96RL1 719 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 SUGCTQ9HAC7 445 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 TMEM260Q9NX78 707 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 ERAP1Q9NZ08 941 aa17.78■□□□□ 0.44
TPM1-211ENST00000558314 SMCO2A6NFE2 343 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 DDX39AO00148 427 aaKnown RBP17.77■□□□□ 0.44
TPM1-211ENST00000558314 ZNF76P36508 570 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 ERVK-21P61565 698 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 EXOSC10Q01780 885 aaKnown RBP17.77■□□□□ 0.44
TPM1-211ENST00000558314 TYW1BQ6NUM6 668 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 RSPH3Q86UC2 560 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 CYP2W1Q8TAV3 490 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 HLA-CQ95604 372 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 IFIH1Q9BYX4 1025 aaKnown RBP17.77■□□□□ 0.44
TPM1-211ENST00000558314 FAM49AQ9H0Q0 323 aaPredicted RBP17.77■□□□□ 0.44
TPM1-211ENST00000558314 SMARCAD1Q9H4L7 1026 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 AZI2Q9H6S1 392 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 JPH1Q9HDC5 661 aaPredicted RBP17.77■□□□□ 0.44
TPM1-211ENST00000558314 TRPC6Q9Y210 931 aa17.77■□□□□ 0.44
TPM1-211ENST00000558314 CAND2O75155 1236 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 POU3F3P20264 500 aaPredicted RBP17.76■□□□□ 0.43
TPM1-211ENST00000558314 IBSPP21815 317 aaPredicted RBP17.76■□□□□ 0.43
TPM1-211ENST00000558314 KRT32Q14532 448 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 MXRA8Q9BRK3 442 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 RIC8AQ9NPQ8 531 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 SLC9A2Q9UBY0 812 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 TUBE1Q9UJT0 475 aa17.76■□□□□ 0.43
TPM1-211ENST00000558314 TCF20Q9UGU0 1960 aaKnown RBP17.76■□□□□ 0.43
TPM1-211ENST00000558314 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
TPM1-211ENST00000558314 STXBP3O00186 592 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 CHRNA1P02708 482 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 ARP10275 920 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 CDC27P30260 824 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 APOBRQ0VD83 1088 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 JAKMIP1Q96N16 626 aaKnown RBP17.75■□□□□ 0.43
TPM1-211ENST00000558314 KCNH7Q9NS40 1196 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 COG5Q9UP83 839 aa17.75■□□□□ 0.43
TPM1-211ENST00000558314 SPTBN5Q9NRC6 3674 aaKnown RBP17.75■□□□□ 0.43
TPM1-211ENST00000558314 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.74■□□□□ 0.43
TPM1-211ENST00000558314 CSPG5O95196 566 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 BMP1P13497 986 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 METAP2P50579 478 aaKnown RBP eCLIP17.74■□□□□ 0.43
TPM1-211ENST00000558314 ADAM17P78536 824 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 TMEM62Q0P6H9 643 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 PPP1R18Q6NYC8 613 aa17.74■□□□□ 0.43
TPM1-211ENST00000558314 TAF2Q6P1X5 1199 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms