RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ACTR2P61160 394 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 BEX3Q00994 111 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 PDIA5Q14554 519 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 SF3A1Q15459 793 aaKnown RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 KCNA10Q16322 511 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 TMEM266Q2M3C6 531 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 CCSAPQ6IQ19 270 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 MIS18BP1Q6P0N0 1132 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 FAM173BQ6P4H8 233 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 RAB34Q9BZG1 259 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 TMEM60Q9H2L4 133 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 CHMP5Q9NZZ3 219 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 PCDHA10Q9Y5I2 948 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
LRRC28-204ENST00000558172 MORC2Q9Y6X9 1032 aaPredicted RBP11.81□□□□□ -0.52
LRRC28-204ENST00000558172 GSTTP1A0A1W2PQM5 241 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 MYADML2A6NDP7 307 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 CCDC85CA6NKD9 419 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 SORBS3O60504 671 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 ASGR1P07306 291 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 PSAPP07602 524 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 MYL3P08590 195 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 PTGS1P23219 599 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 TCF7P36402 384 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-204ENST00000558172 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
LRRC28-204ENST00000558172 ACLYP53396 1101 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 SP4Q02446 784 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 DTHD1Q6ZMT9 781 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 MIER3Q7Z3K6 550 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 UIMC1Q96RL1 719 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 USP28Q96RU2 1077 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
LRRC28-204ENST00000558172 SEZ6LQ9BYH1 1024 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 UNC45AQ9H3U1 944 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 PHF24Q9UPV7 400 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 SAMM50Q9Y512 469 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 LOXHD1Q8IVV2 1947 aa11.8□□□□□ -0.52
LRRC28-204ENST00000558172 IGKV6D-21A0A0A0MT36 114 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 DKC1O60832 514 aaKnown RBP eCLIP11.79□□□□□ -0.52
LRRC28-204ENST00000558172 LGR5O75473 907 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 YEATS4O95619 227 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 CCNE2O96020 404 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 SUPT20HL2P0C7V6 817 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 TECP42680 631 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 NASPP49321 788 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-204ENST00000558172 SLC26A2P50443 739 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 PURAQ00577 322 aaKnown RBP11.79□□□□□ -0.52
LRRC28-204ENST00000558172 SLC39A14Q15043 492 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 STK38Q15208 465 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 EPHA7Q15375 998 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 FAM160B1Q5W0V3 765 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 PLPPR4Q7Z2D5 763 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 TNPO1Q92973 898 aaKnown RBP11.79□□□□□ -0.52
LRRC28-204ENST00000558172 GJA10Q969M2 543 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 KATNAL1Q9BW62 490 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 SMARCAD1Q9H4L7 1026 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 AZI2Q9H6S1 392 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-204ENST00000558172 CLIC4Q9Y696 253 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 TRIP12Q14669 1992 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-204ENST00000558172 EMSYQ7Z589 1322 aa11.79□□□□□ -0.52
LRRC28-204ENST00000558172 CHMP2AO43633 222 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 PPP6R2O75170 966 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 LGALS2P05162 132 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-204ENST00000558172 STAT5BP51692 787 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 KRT85P78386 507 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
LRRC28-204ENST00000558172 CEBPZQ03701 1054 aaKnown RBP11.78□□□□□ -0.52
LRRC28-204ENST00000558172 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
LRRC28-204ENST00000558172 SPIRE1Q08AE8 756 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 PTPAQ15257 358 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 UTP14CQ5TAP6 766 aaKnown RBP11.78□□□□□ -0.52
LRRC28-204ENST00000558172 NCAPH2Q6IBW4 605 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 NECAB2Q7Z6G3 386 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 ERMNQ8TAM6 284 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 AFAP1L1Q8TED9 768 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 GLG1Q92896 1179 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 FERMT2Q96AC1 680 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 C16orf70Q9BSU1 422 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 ZNF302Q9NR11 478 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
LRRC28-204ENST00000558172 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
LRRC28-204ENST00000558172 H3BRB1 525 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 BACH1O14867 736 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 SPTLC2O15270 562 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 F2P00734 622 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 P4HBP07237 508 aaKnown RBP11.77□□□□□ -0.53
LRRC28-204ENST00000558172 COL6A1P12109 1028 aa11.77□□□□□ -0.53
LRRC28-204ENST00000558172 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms