RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 EIF2AK1Q9BQI3 630 aaKnown RBP18.92■□□□□ 0.62
SNX1-203ENST00000558040 TUFT1Q9NNX1 390 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 STK17AQ9UEE5 414 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 SERTAD1Q9UHV2 236 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
SNX1-203ENST00000558040 SAMM50Q9Y512 469 aa18.92■□□□□ 0.62
SNX1-203ENST00000558040 RBM47A0AV96 593 aaKnown RBP18.91■□□□□ 0.62
SNX1-203ENST00000558040 EML1O00423 815 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 ACTN4O43707 911 aaKnown RBP18.91■□□□□ 0.62
SNX1-203ENST00000558040 TXNP10599 105 aaKnown RBP18.91■□□□□ 0.62
SNX1-203ENST00000558040 GRB10Q13322 594 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 E2F4Q16254 413 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 TMEM119Q4V9L6 283 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 CD99L2Q8TCZ2 262 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 ZHX1Q9UKY1 873 aaPredicted RBP18.91■□□□□ 0.62
SNX1-203ENST00000558040 MCM3APO60318 1980 aa18.91■□□□□ 0.62
SNX1-203ENST00000558040 GGPS1O95749 300 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 FLT3LGP49771 235 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 SP2Q02086 613 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 PRKCZQ05513 592 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 CAMK4Q16566 473 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 MFSD14CQ5VZR4 134 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 TAPT1Q6NXT6 567 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 CCDC62Q6P9F0 684 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 METTL7BQ6UX53 244 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 CYFIP1Q7L576 1253 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 PNMA5Q96PV4 448 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 MLXIPQ9HAP2 919 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 PCDHA10Q9Y5I2 948 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 DOCK3Q8IZD9 2030 aa18.9■□□□□ 0.62
SNX1-203ENST00000558040 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 POTEB3A0JP26 581 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 MED24O75448 989 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 FARP2O94887 1054 aaPredicted RBP18.89■□□□□ 0.61
SNX1-203ENST00000558040 CCNE2O96020 404 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 P4HBP07237 508 aaKnown RBP18.89■□□□□ 0.61
SNX1-203ENST00000558040 PSAPP07602 524 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 CCL14Q16627 93 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 LY6KQ17RY6 165 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 CELF3Q5SZQ8 465 aaKnown RBP18.89■□□□□ 0.61
SNX1-203ENST00000558040 IQSEC1Q6DN90 963 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 MIS18BP1Q6P0N0 1132 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 PDXDC2PQ6P474 469 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 POTEBQ6S5H4 581 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 CATSPER3Q86XQ3 398 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 PLIN2Q99541 437 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 HSD17B14Q9BPX1 270 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
SNX1-203ENST00000558040 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 FLRT1Q9NZU1 646 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 SRRDQ9UH36 339 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 NRBP1Q9UHY1 535 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 GABRQQ9UN88 632 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 KIAA1024Q9UPX6 916 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 CASP8AP2Q9UKL3 1982 aa18.89■□□□□ 0.61
SNX1-203ENST00000558040 NKRFO15226 690 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNX1-203ENST00000558040 DKC1O60832 514 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNX1-203ENST00000558040 ARIH2O95376 493 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 SPATA31C1P0DKV0 1188 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 ACTR2P61160 394 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 CYP4A11Q02928 519 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 ZSCAN23Q3MJ62 389 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 TPH2Q8IWU9 490 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 DHX37Q8IY37 1157 aaKnown RBP18.88■□□□□ 0.61
SNX1-203ENST00000558040 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
SNX1-203ENST00000558040 RGL1Q9NZL6 768 aa18.88■□□□□ 0.61
SNX1-203ENST00000558040 POTEFA5A3E0 1075 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 NOP56O00567 594 aaKnown RBP18.87■□□□□ 0.61
SNX1-203ENST00000558040 SLITRK3O94933 977 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 GH1P01241 217 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 IGHA2P01877 340 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 CYP2C19P33261 490 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 QARSP47897 775 aaKnown RBP18.87■□□□□ 0.61
SNX1-203ENST00000558040 PRMT2P55345 433 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 AMPD3Q01432 767 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 SP4Q02446 784 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 LAMC2Q13753 1193 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
SNX1-203ENST00000558040 POSTNQ15063 836 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 NAALADL2Q58DX5 795 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 POTEGQ6S5H5 508 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 LARP4BQ92615 738 aaKnown RBP18.87■□□□□ 0.61
SNX1-203ENST00000558040 RAD54LQ92698 747 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 ATP6V0A1Q93050 837 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 LXNQ9BS40 222 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 LRRC27Q9C0I9 530 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
SNX1-203ENST00000558040 SORBS3O60504 671 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 MYL1P05976 194 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 SUPT20HL2P0C7V6 817 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 PSMC5P62195 406 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 ECM1Q16610 540 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 CCDC144BQ3MJ40 725 aa18.86■□□□□ 0.61
SNX1-203ENST00000558040 DUSP28Q4G0W2 176 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms