RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 CHRNA1P02708 482 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 NPR3P17342 541 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 HOXC8P31273 242 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 TECP42680 631 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 GIMAP6Q6P9H5 292 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 BTNL9Q6UXG8 535 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 CCDC105Q8IYK2 499 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 UBALD2Q8IYN6 164 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 CYP2W1Q8TAV3 490 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 MICAL1Q8TDZ2 1067 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 LINC01599Q8WXQ3 324 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 CPVLQ9H3G5 476 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 SETD4Q9NVD3 440 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 DOCK5Q9H7D0 1870 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 CACNA1IQ9P0X4 2223 aa13.05□□□□□ -0.32
CGRRF1-209ENST00000557755 GPAA1O43292 621 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 CLCN5P51795 746 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 ERVFC1P60507 584 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 LAMC2Q13753 1193 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 DUSP6Q16828 381 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 IFNL3Q8IZI9 196 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 FEZF2Q8TBJ5 459 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 DCAF4Q8WV16 495 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 RIN2Q8WYP3 895 aaPredicted RBP13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 APBB2Q92870 758 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 POMKQ9H5K3 350 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 KAT6AQ92794 2004 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 FRYLO94915 3013 aa13.04□□□□□ -0.32
CGRRF1-209ENST00000557755 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 IBSPP21815 317 aaPredicted RBP13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 SP2Q02086 613 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 PPARAQ07869 468 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 APOBRQ0VD83 1088 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 LPIN1Q14693 890 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 STXBP2Q15833 593 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 MYSM1Q5VVJ2 828 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 DTWD2Q8NBA8 298 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 GPKOWQ92917 476 aaPredicted RBP eCLIP13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 LOXHD1Q8IVV2 1947 aa13.03□□□□□ -0.32
CGRRF1-209ENST00000557755 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 B4DLN1 442 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 PPFIA4O75335 1185 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 GGPS1O95749 300 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 AOC1P19801 751 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 KCNC3Q14003 757 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 FAM26DQ5JW98 314 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 ZKSCAN2Q63HK3 967 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 RTN4RL1Q86UN2 441 aaPredicted RBP13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 TRIM50Q86XT4 487 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 TELO2Q9Y4R8 837 aa13.02□□□□□ -0.33
CGRRF1-209ENST00000557755 H3BRB1 525 aa13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 CELF3Q5SZQ8 465 aaKnown RBP13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 KANK3Q6NY19 840 aa13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 CRIPAKQ8N1N5 446 aa13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 APPBP2Q92624 585 aa13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 TUT1Q9H6E5 874 aaKnown RBP13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
CGRRF1-209ENST00000557755 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 MYH6P13533 1939 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 WDR19Q8NEZ3 1342 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 CAND2O75155 1236 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 LGALS2P05162 132 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 NR3C2P08235 984 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 PRR29P0C7W0 189 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 AGO3Q9H9G7 860 aaKnown RBP13□□□□□ -0.33
CGRRF1-209ENST00000557755 ERVK-5Q9HDB9 667 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 NR2E1Q9Y466 385 aa13□□□□□ -0.33
CGRRF1-209ENST00000557755 FNDC1Q4ZHG4 1894 aaPredicted RBP12.99□□□□□ -0.33
CGRRF1-209ENST00000557755 DCDC2BA2VCK2 349 aa12.99□□□□□ -0.33
CGRRF1-209ENST00000557755 HIDE1A8MVS5 230 aa12.99□□□□□ -0.33
CGRRF1-209ENST00000557755 PATL2C9JE40 543 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms