RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 RETREG2Q8NC44 543 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 CAGE1Q8TC20 777 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 MLXIPQ9HAP2 919 aa13.1□□□□□ -0.31
LINC00648-204ENST00000557749 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
LINC00648-204ENST00000557749 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 KLF18A0A0U1RQI7 1052 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 B4GALT4O60513 344 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 ARIH2O95376 493 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00648-204ENST00000557749 PSMC6P62333 389 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 AKAP17AQ02040 695 aaKnown RBP13.09□□□□□ -0.31
LINC00648-204ENST00000557749 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 SHHQ15465 462 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 NBPF20Q3BBV1 942 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
LINC00648-204ENST00000557749 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 C7orf31Q8N865 590 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 SPATA33Q96N06 139 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
LINC00648-204ENST00000557749 INPP4AQ96PE3 977 aaPredicted RBP13.09□□□□□ -0.31
LINC00648-204ENST00000557749 SENP7Q9BQF6 1050 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
LINC00648-204ENST00000557749 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 IL23AQ9NPF7 189 aa13.09□□□□□ -0.31
LINC00648-204ENST00000557749 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
LINC00648-204ENST00000557749 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
LINC00648-204ENST00000557749 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
LINC00648-204ENST00000557749 GGPS1O95749 300 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 F2P00734 622 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 ACTN1P12814 892 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
LINC00648-204ENST00000557749 NDUFV2P19404 249 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 RXRAP19793 462 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 NAPAP54920 295 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 METTL7BQ6UX53 244 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 DEFB123Q8N688 67 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 COPS5Q92905 334 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 GPRASP2Q96D09 838 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
LINC00648-204ENST00000557749 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
LINC00648-204ENST00000557749 SLC27A5Q9Y2P5 690 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 GRIN2DO15399 1336 aa13.08□□□□□ -0.32
LINC00648-204ENST00000557749 NID2Q14112 1375 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 MEIS2O14770 477 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 CSF2RAP15509 400 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 UBA1P22314 1058 aaKnown RBP13.07□□□□□ -0.32
LINC00648-204ENST00000557749 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 ITGB8P26012 769 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 AP3B2Q13367 1082 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 SCUBE3Q8IX30 993 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 AFAP1L1Q8TED9 768 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
LINC00648-204ENST00000557749 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
LINC00648-204ENST00000557749 FGBP02675 491 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 GNAT1P11488 350 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 ADCY7P51828 1080 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 RAB30Q15771 203 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 PTGISQ16647 500 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 C9orf50Q5SZB4 431 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
LINC00648-204ENST00000557749 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 Q6ZUG5 572 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 FAM177A1Q8N128 213 aaPredicted RBP13.06□□□□□ -0.32
LINC00648-204ENST00000557749 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 HERVK_113Q902F9 699 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 THAP11Q96EK4 314 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 AGXT2Q9BYV1 514 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 RIC8AQ9NPQ8 531 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 TRMT13Q9NUP7 481 aaKnown RBP13.06□□□□□ -0.32
LINC00648-204ENST00000557749 BARHL2Q9NY43 387 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 GTF2IRD1Q9UHL9 959 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
LINC00648-204ENST00000557749 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 RGS20O76081 388 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 RPLP2P05387 115 aaKnown RBP13.05□□□□□ -0.32
LINC00648-204ENST00000557749 GNA11P29992 359 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 CYP2C18P33260 490 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 USP46P62068 366 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 RBL2Q08999 1139 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 MTMR1Q13613 665 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms