RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ADAMTS3O15072 1205 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 B4GALT4O60513 344 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 ATP9AO75110 1047 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 TIMP1P01033 207 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 ZNF286BP0CG31 522 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 CIITAP33076 1130 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 PSEN2P49810 448 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 MDM2Q00987 491 aaPredicted RBP14.21□□□□□ -0.13
SLIRP-211ENST00000557623 MFSD10Q14728 455 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 SESTD1Q86VW0 696 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 PLA2G4DQ86XP0 818 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 CYP2W1Q8TAV3 490 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 KAT2BQ92831 832 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 BACH2Q9BYV9 841 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 UBE2OQ9C0C9 1292 aaKnown RBP14.21□□□□□ -0.13
SLIRP-211ENST00000557623 PRO3102Q9H379 93 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 AGO4Q9HCK5 861 aaKnown RBP14.21□□□□□ -0.13
SLIRP-211ENST00000557623 BRMS1Q9HCU9 246 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 TBX21Q9UL17 535 aa14.21□□□□□ -0.13
SLIRP-211ENST00000557623 MYH9P35579 1960 aaKnown RBP14.2□□□□□ -0.14
SLIRP-211ENST00000557623 TRIP12Q14669 1992 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-211ENST00000557623 WDR81Q562E7 1941 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 M0R2N6 131 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 HAS3O00219 553 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 LGALS2P05162 132 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 ARP10275 920 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 FDPSP14324 419 aaKnown RBP14.2□□□□□ -0.14
SLIRP-211ENST00000557623 MCM2P49736 904 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 TRIM29Q14134 588 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 KRT25Q7Z3Z0 450 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 C7orf31Q8N865 590 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 SEPT1Q8WYJ6 367 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 BADQ92934 168 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 C16orf70Q9BSU1 422 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 TRPV6Q9H1D0 765 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 JPH1Q9HDC5 661 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-211ENST00000557623 PKD2L1Q9P0L9 805 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 SLC9A2Q9UBY0 812 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 ZNF215Q9UL58 517 aaPredicted RBP14.2□□□□□ -0.14
SLIRP-211ENST00000557623 KCNJ14Q9UNX9 436 aa14.2□□□□□ -0.14
SLIRP-211ENST00000557623 CEP290O15078 2479 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 IGLV3-22A0A075B6J6 115 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 CCDC194A0A1B0GVG4 234 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 FAM86B1E9PN63 330 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 H3BRB1 525 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 FAM86B2P0C5J1 330 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 HMGN5P82970 282 aaKnown RBP14.19□□□□□ -0.14
SLIRP-211ENST00000557623 SP4Q02446 784 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 ST3GAL1Q11201 340 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 NONOQ15233 471 aaKnown RBP eCLIP14.19□□□□□ -0.14
SLIRP-211ENST00000557623 NPY5RQ15761 445 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 HABP4Q5JVS0 413 aaKnown RBP14.19□□□□□ -0.14
SLIRP-211ENST00000557623 TMEM199Q8N511 208 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 HIPK3Q9H422 1215 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 TUT1Q9H6E5 874 aaKnown RBP14.19□□□□□ -0.14
SLIRP-211ENST00000557623 TRMT13Q9NUP7 481 aaKnown RBP14.19□□□□□ -0.14
SLIRP-211ENST00000557623 GTF2IRD1Q9UHL9 959 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 NOD1Q9Y239 953 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 DNAH12Q6ZR08 3092 aa14.19□□□□□ -0.14
SLIRP-211ENST00000557623 IPO5O00410 1097 aaKnown RBP14.18□□□□□ -0.14
SLIRP-211ENST00000557623 SNPHO15079 494 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 JAK2O60674 1132 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 ITGB8P26012 769 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 KRT2P35908 639 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 TCF7P36402 384 aaPredicted RBP14.18□□□□□ -0.14
SLIRP-211ENST00000557623 PTGISQ16647 500 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 PRR16Q569H4 304 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 UTP14CQ5TAP6 766 aaKnown RBP14.18□□□□□ -0.14
SLIRP-211ENST00000557623 MFSD5Q6N075 450 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 MOXD1Q6UVY6 613 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 HDAC6Q9UBN7 1215 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 TCEAL9Q9UHQ7 104 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 TANC1Q9C0D5 1861 aa14.18□□□□□ -0.14
SLIRP-211ENST00000557623 GSTTP1A0A1W2PQM5 241 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 FPGSQ05932 587 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 ITGB3BPQ13352 177 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-211ENST00000557623 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.14
SLIRP-211ENST00000557623 BFSP2Q13515 415 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
SLIRP-211ENST00000557623 TDHQ8IZJ6 230 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 CCDC155Q8N6L0 562 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 NAP1L4Q99733 375 aaKnown RBP14.17□□□□□ -0.14
SLIRP-211ENST00000557623 NOC4LQ9BVI4 516 aaKnown RBP14.17□□□□□ -0.14
SLIRP-211ENST00000557623 PPP1R12CQ9BZL4 782 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
SLIRP-211ENST00000557623 EMSYQ7Z589 1322 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 CYP3A7-CYP3A51PA0A087WV96 503 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 DTNBO60941 627 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 MMP1P03956 469 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 GNAT1P11488 350 aa14.16□□□□□ -0.14
SLIRP-211ENST00000557623 CYP3A7P24462 503 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms