RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CELF2O95319 508 aaKnown RBP13.9□□□□□ -0.18
SHMT2-233ENST00000557529 SFNP31947 248 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 JAK3P52333 1124 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 KRT76Q01546 638 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 EHHADHQ08426 723 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 STK4Q13043 487 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 ITGB3BPQ13352 177 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-233ENST00000557529 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
SHMT2-233ENST00000557529 GNPTABQ3T906 1256 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 CDKAL1Q5VV42 579 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 NCAPG2Q86XI2 1143 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 TPH2Q8IWU9 490 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 PURBQ96QR8 312 aaKnown RBP13.9□□□□□ -0.18
SHMT2-233ENST00000557529 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.18
SHMT2-233ENST00000557529 PANK4Q9NVE7 773 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 RGL1Q9NZL6 768 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 PKD2L1Q9P0L9 805 aa13.9□□□□□ -0.18
SHMT2-233ENST00000557529 ADD3Q9UEY8 706 aaKnown RBP13.9□□□□□ -0.18
SHMT2-233ENST00000557529 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 KIF20AO95235 890 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 CCNE1P24864 410 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 PSMC6P62333 389 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 COASYQ13057 564 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 STXBP2Q15833 593 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 GUF1Q8N442 669 aaKnown RBP13.89□□□□□ -0.19
SHMT2-233ENST00000557529 P2RX5Q93086 422 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
SHMT2-233ENST00000557529 MROH8Q9H579 483 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 IMPACTQ9P2X3 320 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 MAPK8IP1Q9UQF2 711 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 ZKSCAN5Q9Y2L8 839 aa13.89□□□□□ -0.19
SHMT2-233ENST00000557529 FRMD3A2A2Y4 597 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 DDX39AO00148 427 aaKnown RBP13.88□□□□□ -0.19
SHMT2-233ENST00000557529 EIF3JO75822 258 aaKnown RBP13.88□□□□□ -0.19
SHMT2-233ENST00000557529 LYPLA2O95372 231 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
SHMT2-233ENST00000557529 ZBTB48P10074 688 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-233ENST00000557529 FCER1AP12319 257 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 ERCC3P19447 782 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 MSNP26038 577 aaKnown RBP13.88□□□□□ -0.19
SHMT2-233ENST00000557529 ARSHQ5FYA8 562 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 FAM26FQ5R3K3 315 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 ZNF746Q6NUN9 644 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-233ENST00000557529 FOXR2Q6PJQ5 311 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 ANKRD23Q86SG2 305 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 KIAA0895Q8NCT3 520 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 SHCBP1Q8NEM2 672 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 SENP7Q9BQF6 1050 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 LXNQ9BS40 222 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 BHMT2Q9H2M3 363 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 ZSWIM4Q9H7M6 989 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 SLC39A2Q9NP94 309 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 KCND2Q9NZV8 630 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 SAMM50Q9Y512 469 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 NFASCO94856 1347 aa13.88□□□□□ -0.19
SHMT2-233ENST00000557529 CCL15-CCL14A0A0B4J2E2 113 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 WDR64B1ANS9 1081 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 SPATA31C2B4DYI2 1134 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-233ENST00000557529 GSDMDP57764 484 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 CCNA1P78396 465 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 GIT2Q14161 759 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 KCTD2Q14681 263 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 CCL15Q16663 113 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 FILIP1LQ4L180 1135 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 HERC4Q5GLZ8 1057 aaPredicted RBP13.87□□□□□ -0.19
SHMT2-233ENST00000557529 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 TTI2Q6NXR4 508 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 CCDC186Q7Z3E2 898 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 FAM133AQ8N9E0 248 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 TRIM47Q96LD4 638 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 NMRK2Q9NPI5 230 aa13.87□□□□□ -0.19
SHMT2-233ENST00000557529 PDHXO00330 501 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 SOCS7O14512 581 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 ATP9AO75110 1047 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 TBCAO75347 108 aaKnown RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 FGFR1OPO95684 399 aaKnown RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 GAP43P17677 238 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 PTGS1P23219 599 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 EDNRBP24530 442 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 ICAM3P32942 547 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 QARSP47897 775 aaKnown RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 ERVK-9P63128 1117 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 ERVK-24P63145 666 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 CNTN2Q02246 1040 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 HSP90AA4PQ58FG1 418 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 RINT1Q6NUQ1 792 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 FAM114A1Q8IWE2 563 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-233ENST00000557529 MYOCDQ8IZQ8 938 aa13.86□□□□□ -0.19
SHMT2-233ENST00000557529 FAM43AQ8N2R8 423 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms