RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 BRD1O95696 1058 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 GGPS1O95749 300 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 LGALS2P05162 132 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 NR3C2P08235 984 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 FGRP09769 529 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 ADAM17P78536 824 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 ARHGEF16Q5VV41 709 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 LINC01599Q8WXQ3 324 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 NEK1Q96PY6 1258 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
TRAV33-201ENST00000557514 S1PR5Q9H228 398 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 TLE6Q9H808 572 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.46
TRAV33-201ENST00000557514 OTOGLQ3ZCN5 2332 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 ENPP3O14638 875 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 CHRNA1P02708 482 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 CLCN5P51795 746 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 KCNC3Q14003 757 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 LPIN1Q14693 890 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 CDC37Q16543 378 aaPredicted RBP12.14□□□□□ -0.47
TRAV33-201ENST00000557514 DUSP6Q16828 381 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 TMEM184AQ6ZMB5 413 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 LMBR1Q8WVP7 490 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 SPTBN2O15020 2390 aa12.14□□□□□ -0.47
TRAV33-201ENST00000557514 PER2O15055 1255 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 SORBS3O60504 671 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 GNAT1P11488 350 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 SP2Q02086 613 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 GHRHRQ02643 423 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 UBE3AQ05086 875 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 MGAT3Q09327 533 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 GPATCH4Q5T3I0 446 aaKnown RBP12.13□□□□□ -0.47
TRAV33-201ENST00000557514 TSHZ3Q63HK5 1081 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 CWF19L1Q69YN2 538 aaKnown RBP12.13□□□□□ -0.47
TRAV33-201ENST00000557514 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 SMOC2Q9H3U7 446 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
TRAV33-201ENST00000557514 TGFB3P10600 412 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 HSPD1P10809 573 aaKnown RBP12.12□□□□□ -0.47
TRAV33-201ENST00000557514 SP100P23497 879 aaPredicted RBP12.12□□□□□ -0.47
TRAV33-201ENST00000557514 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAV33-201ENST00000557514 ZMYM1Q5SVZ6 1142 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 ANKRD54Q6NXT1 300 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 TAF2Q6P1X5 1199 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 SYCE2Q6PIF2 218 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 TRIM50Q86XT4 487 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 RASGRP4Q8TDF6 673 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 ZBTB40Q9NUA8 1239 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 DLL3Q9NYJ7 618 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 NR2E1Q9Y466 385 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 ATRXP46100 2492 aa12.12□□□□□ -0.47
TRAV33-201ENST00000557514 C2CD4DB7Z1M9 353 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 OPLAHO14841 1288 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 SMARCA5O60264 1052 aaPredicted RBP12.11□□□□□ -0.47
TRAV33-201ENST00000557514 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 HSD17B4P51659 736 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 FBXO47Q5MNV8 452 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 CCDC105Q8IYK2 499 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 IL31RAQ8NI17 732 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 GPATCH3Q96I76 525 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 USP26Q9BXU7 913 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
TRAV33-201ENST00000557514 BAHCC1Q9P281 2608 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 FSCN2O14926 492 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 GOLGA8HP0CJ92 632 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 HOXB8P17481 243 aaPredicted RBP12.1□□□□□ -0.47
TRAV33-201ENST00000557514 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 ANGPT1Q15389 498 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 QRICH1Q2TAL8 776 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 PAN2Q504Q3 1202 aaKnown RBP12.1□□□□□ -0.47
TRAV33-201ENST00000557514 METTL7BQ6UX53 244 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 VSIG10LQ86VR7 867 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
TRAV33-201ENST00000557514 TTC14Q96N46 770 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 SEMA4AQ9H3S1 761 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
TRAV33-201ENST00000557514 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 CDH22Q9UJ99 828 aa12.1□□□□□ -0.47
TRAV33-201ENST00000557514 ZNF215Q9UL58 517 aaPredicted RBP12.1□□□□□ -0.47
TRAV33-201ENST00000557514 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
TRAV33-201ENST00000557514 SUPT16HQ9Y5B9 1047 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms