RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 KCNA5P22460 613 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 NOVP48745 357 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 ERVK-21P61565 698 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 RPS6P62753 249 aaKnown RBP6.88□□□□□ -1.31
VPS33B-207ENST00000557470 LEXMQ3ZCV2 418 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 ZMYM1Q5SVZ6 1142 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF787Q6DD87 383 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 GDF6Q6KF10 455 aaPredicted RBP6.88□□□□□ -1.31
VPS33B-207ENST00000557470 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 RNF207Q6ZRF8 634 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 LRRC8DQ7L1W4 858 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 RETREG3Q86VR2 466 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 FAM178BQ8IXR5 827 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 GJD3Q8N144 294 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 CCDC155Q8N6L0 562 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.88□□□□□ -1.31
VPS33B-207ENST00000557470 CAGE1Q8TC20 777 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 AFG1LQ8WV93 481 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 KAT2BQ92831 832 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 TGS1Q96RS0 853 aaKnown RBP6.88□□□□□ -1.31
VPS33B-207ENST00000557470 RAD9AQ99638 391 aa6.88□□□□□ -1.31
VPS33B-207ENST00000557470 ORC4O43929 436 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 CXCL10P02778 98 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 MMP3P08254 477 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 CKBP12277 381 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 MRE11P49959 708 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 RBL2Q08999 1139 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 LY6KQ17RY6 165 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 PTCRAQ6ISU1 281 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-207ENST00000557470 FAM117BQ6P1L5 589 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 CCDC62Q6P9F0 684 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 CNKSR3Q6P9H4 555 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 SESTD1Q86VW0 696 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 CYP4X1Q8N118 509 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 DNERQ8NFT8 737 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 UIMC1Q96RL1 719 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 MPHOSPH6Q99547 160 aaKnown RBP6.87□□□□□ -1.31
VPS33B-207ENST00000557470 FSD1Q9BTV5 496 aa6.87□□□□□ -1.31
VPS33B-207ENST00000557470 CHMP4BQ9H444 224 aaKnown RBP6.87□□□□□ -1.31
VPS33B-207ENST00000557470 TRIP12Q14669 1992 aaPredicted RBP6.87□□□□□ -1.31
VPS33B-207ENST00000557470 WDR19Q8NEZ3 1342 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 SIP14410 1827 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ABHD14A-ACY1A0A1B0GW23 586 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 H3BQ06 376 aaPredicted RBP6.86□□□□□ -1.31
VPS33B-207ENST00000557470 PARNO95453 639 aaKnown RBP6.86□□□□□ -1.31
VPS33B-207ENST00000557470 GH1P01241 217 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 PDHBP11177 359 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 TOP1P11387 765 aaKnown RBP6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ALADP13716 330 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF16P17020 682 aaPredicted RBP6.86□□□□□ -1.31
VPS33B-207ENST00000557470 SKOR1P84550 965 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 NHLH1Q02575 133 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ARHGAP1Q07960 439 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 MBTPS1Q14703 1052 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 TRIM71Q2Q1W2 868 aaKnown RBP6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF618Q5T7W0 954 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 C20orf194Q5TEA3 1177 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 VPS53Q5VIR6 699 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 SEPT14Q6ZU15 432 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 PI4K2BQ8TCG2 481 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 OTUD7AQ8TE49 926 aaPredicted RBP6.86□□□□□ -1.31
VPS33B-207ENST00000557470 WNT8BQ93098 351 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 CRBNQ96SW2 442 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 TMEM47Q9BQJ4 181 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 C17orf80Q9BSJ5 609 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 DCTPP1Q9H773 170 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 AAASQ9NRG9 546 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 HDAC6Q9UBN7 1215 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 GTF2IRD1Q9UHL9 959 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 ANAPC4Q9UJX5 808 aa6.86□□□□□ -1.31
VPS33B-207ENST00000557470 TTC41PQ6P2S7 1318 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 B4DLN1 442 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 WNT7AO00755 349 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 DCXO43602 365 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 EFCAB14O75071 495 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 FGRP09769 529 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF286BP0CG31 522 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 MRPL12P52815 198 aaKnown RBP6.85□□□□□ -1.31
VPS33B-207ENST00000557470 ZNF200P98182 395 aaPredicted RBP6.85□□□□□ -1.31
VPS33B-207ENST00000557470 PTK7Q13308 1070 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 IKBKEQ14164 716 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 DGKDQ16760 1214 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 CSPP1Q1MSJ5 1256 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 USH1GQ495M9 461 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 RRP12Q5JTH9 1297 aaKnown RBP6.85□□□□□ -1.31
VPS33B-207ENST00000557470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.85□□□□□ -1.31
VPS33B-207ENST00000557470 C7orf31Q8N865 590 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 NEK9Q8TD19 979 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 MRPL38Q96DV4 380 aaKnown RBP6.85□□□□□ -1.31
VPS33B-207ENST00000557470 MRGPRX2Q96LB1 330 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 FBXL18Q96ME1 805 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 ALG1Q9BT22 464 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 CPVLQ9H3G5 476 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 TOMM22Q9NS69 142 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 COL20A1Q9P218 1284 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 DACH1Q9UI36 760 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 PNMA2Q9UL42 364 aa6.85□□□□□ -1.31
VPS33B-207ENST00000557470 PCDHB15Q9Y5E8 787 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms