RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TTC9BQ8N6N2 239 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 ALG1Q9BT22 464 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 CCDC113Q9H0I3 377 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 TMPRSS5Q9H3S3 457 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 PPP4R1LQ9P1A2 415 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 PFDN2Q9UHV9 154 aa6.68□□□□□ -1.34
VRK1-207ENST00000557352 NFATC3Q12968 1075 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 SKIDA1Q1XH10 827 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 CD276Q5ZPR3 534 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 KCTD1Q719H9 257 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 SCUBE1Q8IWY4 988 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 KBTBD2Q8IY47 623 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 NUDT10Q8NFP7 164 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 IGDCC4Q8TDY8 1250 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 NUDT11Q96G61 164 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 C8orf49Q96NF6 230 aa6.67□□□□□ -1.34
VRK1-207ENST00000557352 PPP1R1BQ9UD71 204 aaPredicted RBP6.67□□□□□ -1.34
VRK1-207ENST00000557352 TRBV23-1A0A0A0MS06 115 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 CCDC85CA6NKD9 419 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 ACOT7O00154 380 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 KLHL18O94889 574 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 ATP2B1P20020 1258 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 SSRP1Q08945 709 aaKnown RBP6.66□□□□□ -1.34
VRK1-207ENST00000557352 SMAD2Q15796 467 aaKnown RBP6.66□□□□□ -1.34
VRK1-207ENST00000557352 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 FOXB2Q5VYV0 432 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 CPZQ66K79 652 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 ZBTB38Q8NAP3 1195 aaPredicted RBP6.66□□□□□ -1.34
VRK1-207ENST00000557352 SH3RF2Q8TEC5 729 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 CDC6Q99741 560 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 C1QTNF3Q9BXJ4 246 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 CD244Q9BZW8 370 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 TANGO6Q9C0B7 1094 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 BARX1Q9HBU1 254 aaPredicted RBP6.66□□□□□ -1.34
VRK1-207ENST00000557352 ZDHHC9Q9Y397 364 aa6.66□□□□□ -1.34
VRK1-207ENST00000557352 DIAPH1O60610 1272 aaKnown RBP6.65□□□□□ -1.34
VRK1-207ENST00000557352 KNG1P01042 644 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 CHGBP05060 677 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 ENO2P09104 434 aaPredicted RBP6.65□□□□□ -1.34
VRK1-207ENST00000557352 ZNF20P17024 532 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 GLRBP48167 497 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 PPP2CBP62714 309 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 PPP2CAP67775 309 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 PFKPQ01813 784 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 PAK1Q13153 545 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 FAM209AQ5JX71 171 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 MAMDC2Q7Z304 686 aaPredicted RBP6.65□□□□□ -1.34
VRK1-207ENST00000557352 PTPRN2Q92932 1015 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 ARHGAP20Q9P2F6 1191 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 ZFP69BQ9UJL9 534 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 ADAM29Q9UKF5 820 aa6.65□□□□□ -1.34
VRK1-207ENST00000557352 NPEPPSL1A6NEC2 478 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 ZNF839A8K0R7 811 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 AQP7O14520 342 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 B4GALT4O60513 344 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 FBXO21O94952 628 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 C6orf222P0C671 652 aaPredicted RBP6.64□□□□□ -1.35
VRK1-207ENST00000557352 EPHB4P54760 987 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 SUMO1P63165 101 aaKnown RBP6.64□□□□□ -1.35
VRK1-207ENST00000557352 ARHGEF18Q6ZSZ5 1173 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 STPG3Q8N7X2 389 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 CHST13Q8NET6 341 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 KCND1Q9NSA2 647 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 SIRPGQ9P1W8 387 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 ST6GALNAC2Q9UJ37 374 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 PCDHA8Q9Y5H6 950 aa6.64□□□□□ -1.35
VRK1-207ENST00000557352 C1QTNF3-AMACRE9PGA6 284 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 WNT9AO14904 365 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 IL18BPO95998 194 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 FAM153BP0C7A2 387 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 TNFRSF1AP19438 455 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 Q6ZUG5 572 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 MTDHQ86UE4 582 aaKnown RBP6.63□□□□□ -1.35
VRK1-207ENST00000557352 PCDH19Q8TAB3 1148 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 IPO9Q96P70 1041 aaKnown RBP6.63□□□□□ -1.35
VRK1-207ENST00000557352 PTPN18Q99952 460 aa6.63□□□□□ -1.35
VRK1-207ENST00000557352 GPR42O15529 346 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 ICAM4Q14773 271 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 GPR19Q15760 415 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 ARHGAP36Q6ZRI8 547 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 FBXW5Q969U6 566 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 EXOC2Q96KP1 924 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 JADE2Q9NQC1 790 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 SRPK3Q9UPE1 567 aa6.62□□□□□ -1.35
VRK1-207ENST00000557352 FAM90A27PA6NNH2 459 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 ARVCFO00192 962 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 MATN3O15232 486 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 GTF2F1P35269 517 aaKnown RBP eCLIP6.61□□□□□ -1.35
VRK1-207ENST00000557352 GUCY1A3Q02108 690 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 DBPQ10586 325 aaPredicted RBP6.61□□□□□ -1.35
VRK1-207ENST00000557352 SERINC3Q13530 473 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 BTBD8Q5XKL5 378 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 SLFN13Q68D06 897 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 CIR1Q86X95 450 aaPredicted RBP6.61□□□□□ -1.35
VRK1-207ENST00000557352 NLGN4XQ8N0W4 816 aa6.61□□□□□ -1.35
VRK1-207ENST00000557352 DVL3Q92997 716 aaPredicted RBP6.61□□□□□ -1.35
VRK1-207ENST00000557352 AJUBAQ96IF1 538 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms