RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 NAPAP54920 295 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 EXOSC10Q01780 885 aaKnown RBP16.24■□□□□ 0.19
SNX6-210ENST00000557341 TMCO2Q7Z6W1 182 aaPredicted RBP16.24■□□□□ 0.19
SNX6-210ENST00000557341 TEX2Q8IWB9 1127 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 ZNF713Q8N859 430 aaPredicted RBP16.24■□□□□ 0.19
SNX6-210ENST00000557341 LMBR1Q8WVP7 490 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
SNX6-210ENST00000557341 UBIAD1Q9Y5Z9 338 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 KIAA1671Q9BY89 1806 aa16.24■□□□□ 0.19
SNX6-210ENST00000557341 NRCAMQ92823 1304 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 KLF18A0A0U1RQI7 1052 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 LCHNA4D1U4 455 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 EPOPA6NHQ4 379 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 GOLGA8AA7E2F4 631 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 GOLGA8BA8MQT2 603 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 ATP9AO75110 1047 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 CTSHP09668 335 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
SNX6-210ENST00000557341 RCAN1P53805 252 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 ARHGAP4P98171 946 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 JADE2Q9NQC1 790 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 SETD4Q9NVD3 440 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 TELO2Q9Y4R8 837 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 EVPLQ92817 2033 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 NCOR1O75376 2440 aa16.23■□□□□ 0.19
SNX6-210ENST00000557341 RFXAPO00287 272 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 MAFGO15525 162 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 AMHP03971 560 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 ADCY7P51828 1080 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 FGD1P98174 961 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 PLEKHG4Q58EX7 1191 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 DBF4BQ8NFT6 615 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 SEPT1Q8WYJ6 367 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 RAD9AQ99638 391 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 RIC8AQ9NPQ8 531 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 ERAP1Q9NZ08 941 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 PKD2L1Q9P0L9 805 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 MTCH2Q9Y6C9 303 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 BDP1A6H8Y1 2624 aa16.22■□□□□ 0.19
SNX6-210ENST00000557341 ADAM17P78536 824 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 MRPS5P82675 430 aaKnown RBP16.21■□□□□ 0.19
SNX6-210ENST00000557341 FUT2Q10981 343 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
SNX6-210ENST00000557341 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 SPRED2Q7Z698 418 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 SEPT8Q92599 483 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 ASB2Q96Q27 587 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 ANO3Q9BYT9 981 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 JPH1Q9HDC5 661 aaPredicted RBP16.21■□□□□ 0.19
SNX6-210ENST00000557341 BARHL2Q9NY43 387 aa16.21■□□□□ 0.19
SNX6-210ENST00000557341 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
SNX6-210ENST00000557341 GSTTP1A0A1W2PQM5 241 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 STXBP3O00186 592 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 FOSP01100 380 aaPredicted RBP16.2■□□□□ 0.18
SNX6-210ENST00000557341 MARK3P27448 753 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 METAP2P50579 478 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX6-210ENST00000557341 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 GRB10Q13322 594 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 AP3B2Q13367 1082 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 SKIV2LQ15477 1246 aaKnown RBP16.2■□□□□ 0.18
SNX6-210ENST00000557341 FAM117BQ6P1L5 589 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 TAF2Q6P1X5 1199 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX6-210ENST00000557341 IL27Q8NEV9 243 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 GLG1Q92896 1179 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 PGBD1Q96JS3 809 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 MXRA8Q9BRK3 442 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 GLT8D2Q9H1C3 349 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 TUBE1Q9UJT0 475 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 V9GY48 417 aaPredicted RBP16.2■□□□□ 0.18
SNX6-210ENST00000557341 NID2Q14112 1375 aa16.2■□□□□ 0.18
SNX6-210ENST00000557341 BRWD1Q9NSI6 2320 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 LINC01553A4QN01 128 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 CDC27P30260 824 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 GRIK4Q16099 956 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 FAM26DQ5JW98 314 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 GDPD5Q8WTR4 605 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 APBB2Q92870 758 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 JAKMIP1Q96N16 626 aaKnown RBP16.19■□□□□ 0.18
SNX6-210ENST00000557341 TGS1Q96RS0 853 aaKnown RBP16.19■□□□□ 0.18
SNX6-210ENST00000557341 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 IFIH1Q9BYX4 1025 aaKnown RBP16.19■□□□□ 0.18
SNX6-210ENST00000557341 KCNH7Q9NS40 1196 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 SLC9A2Q9UBY0 812 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 MTUS1Q9ULD2 1270 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 INSL6Q9Y581 213 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 TTC3P53804 2025 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 NFASCO94856 1347 aa16.19■□□□□ 0.18
SNX6-210ENST00000557341 SMCO2A6NFE2 343 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 RBAK-RBAKDNI3L0D1 243 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 HSPA4P34932 840 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 SREBF1P36956 1147 aa16.18■□□□□ 0.18
SNX6-210ENST00000557341 CLK2P49760 499 aaKnown RBP16.18■□□□□ 0.18
SNX6-210ENST00000557341 ERVK-21P61565 698 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms