RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CDCA2Q69YH5 1023 aaPredicted RBP7.26□□□□□ -1.25
FOXN3-215ENST00000557261 ABHD17CQ6PCB6 329 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 KRT27Q7Z3Y8 459 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
FOXN3-215ENST00000557261 TPH2Q8IWU9 490 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 CCDC144CPQ8IYA2 1237 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 NXPE1Q8N323 547 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 BVESQ8NE79 360 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 XAGE3Q8WTP9 111 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 JPH3Q8WXH2 748 aaPredicted RBP7.26□□□□□ -1.25
FOXN3-215ENST00000557261 CHMP4CQ96CF2 233 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 TRERF1Q96PN7 1200 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 KCNK4Q9NYG8 393 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 IP6K2Q9UHH9 426 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 ASAP1Q9ULH1 1129 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 PHF24Q9UPV7 400 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 UBR3Q6ZT12 1888 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 CNTNAP4Q9C0A0 1308 aa7.26□□□□□ -1.25
FOXN3-215ENST00000557261 CASZ1Q86V15 1759 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 QSER1Q2KHR3 1735 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 TCRBV16S1A1N1A0A5B0 115 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 ERVV-1B6SEH8 477 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 ABLIM3O94929 683 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 CYP19A1P11511 503 aaPredicted RBP7.25□□□□□ -1.25
FOXN3-215ENST00000557261 BPIP17213 487 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 GBP1P32455 592 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 YARSP54577 528 aaKnown RBP7.25□□□□□ -1.25
FOXN3-215ENST00000557261 CFAP100Q494V2 611 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 C4orf46Q504U0 113 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 HSP90AB3PQ58FF7 597 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 C10orf62Q5T681 223 aaPredicted RBP7.25□□□□□ -1.25
FOXN3-215ENST00000557261 SYDE2Q5VT97 1194 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 COPS6Q7L5N1 327 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 C11orf96Q7Z7L8 435 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 PASD1Q8IV76 773 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 TCEAL8Q8IYN2 117 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 MAGEB6Q8N7X4 407 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 SSH3Q8TE77 659 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 DHRS1Q96LJ7 313 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 JPH1Q9HDC5 661 aaPredicted RBP7.25□□□□□ -1.25
FOXN3-215ENST00000557261 PICK1Q9NRD5 415 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 AKT3Q9Y243 479 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 AK9Q5TCS8 1911 aa7.25□□□□□ -1.25
FOXN3-215ENST00000557261 VSTM5A8MXK1 200 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 CLEC3AO75596 197 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 PRKD3O94806 890 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 KCNH1O95259 989 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 ASLP04424 464 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 IGKV5-2P06315 115 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 CPEP16870 476 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
FOXN3-215ENST00000557261 ARL4DP49703 201 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 ATP8B2P98198 1209 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 CYP4F3Q08477 520 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 GCKRQ14397 625 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 HSP90AB4PQ58FF6 505 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 PIK3R6Q5UE93 754 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 DENND5AQ6IQ26 1287 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 CHD1LQ86WJ1 897 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 TRIM59Q8IWR1 403 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 DNAJC10Q8IXB1 793 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 MRPL41Q8IXM3 137 aaKnown RBP7.24□□□□□ -1.25
FOXN3-215ENST00000557261 AHI1Q8N157 1196 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 CBARPQ8N350 705 aaPredicted RBP7.24□□□□□ -1.25
FOXN3-215ENST00000557261 CCDC191Q8NCU4 936 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 TTC9Q92623 222 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 USP7Q93009 1102 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 SCARF2Q96GP6 870 aaPredicted RBP7.24□□□□□ -1.25
FOXN3-215ENST00000557261 EMC9Q9Y3B6 208 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 PCDHA9Q9Y5H5 950 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 MAP3K15Q6ZN16 1313 aa7.24□□□□□ -1.25
FOXN3-215ENST00000557261 DDX60Q8IY21 1712 aaKnown RBP7.24□□□□□ -1.25
FOXN3-215ENST00000557261 SPDYE3A6NKU9 549 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 TMPRSS2O15393 492 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 CRTAMO95727 393 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 ALBP02768 609 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 ANXA1P04083 346 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 NAT2P11245 290 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 MYL6BP14649 208 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 MX2P20592 715 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 IARSP41252 1262 aaKnown RBP7.23□□□□□ -1.25
FOXN3-215ENST00000557261 AFF1P51825 1210 aaKnown RBP7.23□□□□□ -1.25
FOXN3-215ENST00000557261 GABREP78334 506 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 GRB10Q13322 594 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
FOXN3-215ENST00000557261 SETDB1Q15047 1291 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 PTPN21Q16825 1174 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 RABL6Q3YEC7 729 aaPredicted RBP7.23□□□□□ -1.25
FOXN3-215ENST00000557261 PRAMEF13Q5VWM6 474 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 KCNT2Q6UVM3 1135 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 KIF6Q6ZMV9 814 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 TICAM2Q86XR7 235 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 TMEM145Q8NBT3 493 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 PPP1R13LQ8WUF5 828 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 CCDC74BQ96LY2 380 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 CAMKK2Q96RR4 588 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 TTC1Q99614 292 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 ISCA1Q9BUE6 129 aa7.23□□□□□ -1.25
FOXN3-215ENST00000557261 MKRN2Q9H000 416 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms