RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GPR182O15218 404 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 RNGTTO60942 597 aaKnown RBP5.98□□□□□ -1.45
SCFD1-223ENST00000557076 CEACAM5P06731 702 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 XRCC5P13010 732 aaKnown RBP5.98□□□□□ -1.45
SCFD1-223ENST00000557076 HIBADHP31937 336 aaKnown RBP5.98□□□□□ -1.45
SCFD1-223ENST00000557076 UBE4AQ14139 1066 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 GRM2Q14416 872 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 TTLL4Q14679 1199 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 SHHQ15465 462 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 DTHD1Q6ZMT9 781 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 PI4KAP1Q8N8J0 262 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 FAM181AQ8N9Y4 354 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 FAM168AQ92567 244 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 TEKT1Q969V4 418 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 ALKBH8Q96BT7 664 aaKnown RBP5.98□□□□□ -1.45
SCFD1-223ENST00000557076 HRASLS5Q96KN8 279 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 ASB2Q96Q27 587 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 NIF3L1Q9GZT8 377 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 TMEM39AQ9NV64 488 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 PPP4R2Q9NY27 417 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 TMOD2Q9NZR1 351 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 GPN3Q9UHW5 284 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-223ENST00000557076 JAG2Q9Y219 1238 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 MAP3K2Q9Y2U5 619 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 SUGT1Q9Y2Z0 365 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 AFG3L2Q9Y4W6 797 aa5.98□□□□□ -1.45
SCFD1-223ENST00000557076 IGHA2P01877 340 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 RNASE1P07998 156 aaKnown RBP5.97□□□□□ -1.45
SCFD1-223ENST00000557076 GCLCP48506 637 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-223ENST00000557076 CACNB3P54284 484 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 CASP7P55210 303 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 NEXNQ0ZGT2 675 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 IFIT5Q13325 482 aaKnown RBP5.97□□□□□ -1.45
SCFD1-223ENST00000557076 GCKRQ14397 625 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 FAM110CQ1W6H9 321 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 HHIPL2Q6UWX4 724 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 FBXO33Q7Z6M2 555 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 ANKRD13CQ8N6S4 541 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 PI4K2BQ8TCG2 481 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 SMCR8Q8TEV9 937 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-223ENST00000557076 TBC1D22AQ8WUA7 517 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 FAM151AQ8WW52 585 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 TMEM40Q8WWA1 233 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 FAM84BQ96KN1 310 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-223ENST00000557076 DUSP23Q9BVJ7 150 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 ZHX2Q9Y6X8 837 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-223ENST00000557076 MUC6Q6W4X9 2439 aa5.97□□□□□ -1.45
SCFD1-223ENST00000557076 MYO9BQ13459 2157 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 ZNF853P0CG23 659 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 OXCT1P55809 520 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 MRPS5P82675 430 aaKnown RBP5.96□□□□□ -1.46
SCFD1-223ENST00000557076 CWF19L2Q2TBE0 894 aaKnown RBP5.96□□□□□ -1.46
SCFD1-223ENST00000557076 AKNAD1Q5T1N1 836 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 ZNF648Q5T619 568 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-223ENST00000557076 CCDC30Q5VVM6 783 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 UBE3BQ7Z3V4 1068 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 PDZD3Q86UT5 571 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 USP38Q8NB14 1042 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 KCNB2Q92953 911 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 SENP6Q9GZR1 1112 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-223ENST00000557076 PICK1Q9NRD5 415 aa5.96□□□□□ -1.46
SCFD1-223ENST00000557076 MBNL3Q9NUK0 354 aaKnown RBP5.96□□□□□ -1.46
SCFD1-223ENST00000557076 DBX1A6NMT0 343 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 CTNND1O60716 968 aaKnown RBP5.95□□□□□ -1.46
SCFD1-223ENST00000557076 LEFTY1O75610 366 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 GYG1P46976 350 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 ERVK-24P63145 666 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 CACNB2Q08289 660 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-223ENST00000557076 PKN1Q16512 942 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 C9orf50Q5SZB4 431 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 LDHAL6AQ6ZMR3 332 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 SULF2Q8IWU5 870 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 HOMEZQ8IX15 550 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 DOCK3Q8IZD9 2030 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 SCYL3Q8IZE3 742 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 RNF214Q8ND24 703 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 TRIB2Q92519 343 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 SNX27Q96L92 541 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 UHRF1Q96T88 793 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-223ENST00000557076 EMILIN2Q9BXX0 1053 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 RBCK1Q9BYM8 510 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 SSU72Q9NP77 194 aaKnown RBP5.95□□□□□ -1.46
SCFD1-223ENST00000557076 AGTPBP1Q9UPW5 1226 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 SNX11Q9Y5W9 270 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 XIRP2A4UGR9 3374 aa5.95□□□□□ -1.46
SCFD1-223ENST00000557076 RPAP1Q9BWH6 1393 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-223ENST00000557076 ELL2O00472 640 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-223ENST00000557076 PLIN1O60240 522 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 FOXO4P98177 505 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 SLC23A3Q6PIS1 610 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 GADL1Q6ZQY3 521 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 LRRN4CLQ8ND94 238 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 EPS8L3Q8TE67 593 aaKnown RBP5.94□□□□□ -1.46
SCFD1-223ENST00000557076 USP6NLQ92738 828 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 ISL2Q96A47 359 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 LRFN3Q9BTN0 628 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 TNKS2Q9H2K2 1166 aa5.94□□□□□ -1.46
SCFD1-223ENST00000557076 ADAMTS6Q9UKP5 1117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms