RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 F5H6K3 240 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 CSPG5O95196 566 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 HOXB8P17481 243 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-245ENST00000556958 CASTP20810 708 aaKnown RBP6.87□□□□□ -1.31
ATXN3-245ENST00000556958 KLRC3Q07444 240 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 G3BP1Q13283 466 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATXN3-245ENST00000556958 CAMK1Q14012 370 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 PLEKHG4Q58EX7 1191 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 PPM1JQ5JR12 505 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 CLEC10AQ8IUN9 316 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 NPAS3Q8IXF0 933 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 APBB2Q92870 758 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 ZNF512BQ96KM6 892 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-245ENST00000556958 NECTIN4Q96NY8 510 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 CTAGE1Q96RT6 745 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 KATNAL1Q9BW62 490 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 GPR108Q9NPR9 543 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 SMC4Q9NTJ3 1288 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 RNF146Q9NTX7 359 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 GTF2IRD1Q9UHL9 959 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 MYH2Q9UKX2 1941 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 PLXNA3P51805 1871 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 VPS13AQ96RL7 3174 aa6.87□□□□□ -1.31
ATXN3-245ENST00000556958 MAGEB6P1A0A0J9YX57 407 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 B4DLN1 442 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 WNT7AO00755 349 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 GLP2RO95838 553 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 PROS1P07225 676 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 TXNP10599 105 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 RFX1P22670 979 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 ZAP70P43403 619 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 CDK8P49336 464 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 MRPL12P52815 198 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 BTG3Q14201 252 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 TRIM71Q2Q1W2 868 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 PDE12Q6L8Q7 609 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 ADGRD2Q7Z7M1 963 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 RPAP2Q8IXW5 612 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 SUMF1Q8NBK3 374 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 SPPL3Q8TCT6 385 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 ATP8B4Q8TF62 1192 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 CHURC1Q8WUH1 139 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 POF1BQ8WVV4 589 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 DDX1Q92499 740 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 HPS1Q92902 700 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 NUP88Q99567 741 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 S1PR5Q9H228 398 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 PIH1D3Q9NQM4 214 aaKnown RBP6.86□□□□□ -1.31
ATXN3-245ENST00000556958 CYP39A1Q9NYL5 469 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 NYAP2Q9P242 653 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 FBXL21Q9UKT6 434 aa6.86□□□□□ -1.31
ATXN3-245ENST00000556958 ADGRA3Q8IWK6 1321 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-245ENST00000556958 H3BM21 787 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 NDUFB10O96000 172 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 SP9P0CG40 484 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 ALAS1P13196 640 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 NPR3P17342 541 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 SP100P23497 879 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-245ENST00000556958 THPOP40225 353 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 ZNF200P98182 395 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-245ENST00000556958 TBC1D8BQ0IIM8 1120 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 DGKDQ16760 1214 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 LRSAM1Q6UWE0 723 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 NSMFQ6X4W1 530 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 TMEM184AQ6ZMB5 413 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 RUFY4Q6ZNE9 571 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 ZDHHC14Q8IZN3 488 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 DYNLL2Q96FJ2 89 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 RIOK1Q9BRS2 568 aaKnown RBP6.85□□□□□ -1.31
ATXN3-245ENST00000556958 DCP1AQ9NPI6 582 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-245ENST00000556958 HDAC6Q9UBN7 1215 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 LIMD1Q9UGP4 676 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 USP18Q9UMW8 372 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 GTF3C3Q9Y5Q9 886 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 GBF1Q92538 1859 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 ZFYVE26Q68DK2 2539 aa6.85□□□□□ -1.31
ATXN3-245ENST00000556958 C2CD4DB7Z1M9 353 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 PER2O15055 1255 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 SPTLC1O15269 473 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 CAND2O75155 1236 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 ITGB1P05556 798 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 MMP3P08254 477 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 TECP42680 631 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 SHC2P98077 582 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 UBE3AQ05086 875 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 ITIH3Q06033 890 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 ANKRD54Q6NXT1 300 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 FAM160B2Q86V87 743 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 C1orf210Q8IVY1 113 aa6.84□□□□□ -1.31
ATXN3-245ENST00000556958 DHX37Q8IY37 1157 aaKnown RBP6.84□□□□□ -1.31
ATXN3-245ENST00000556958 SIX5Q8N196 739 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms