RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 NOP56O00567 594 aaKnown RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 DHX15O43143 795 aaKnown RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 CHMP2AO43633 222 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 MSCO60682 206 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 DUSP11O75319 330 aaKnown RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 FARP2O94887 1054 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 RARBP10826 455 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 SMPD1P17405 629 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 JAK3P52333 1124 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 PPP2R5CQ13362 524 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 BRDTQ58F21 947 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 CELF3Q5SZQ8 465 aaKnown RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 MAP3K21Q5TCX8 1036 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 ADALQ6DHV7 355 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 NCAPH2Q6IBW4 605 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 ZNF746Q6NUN9 644 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 METTL7BQ6UX53 244 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 MIER3Q7Z3K6 550 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 IGSF22Q8N9C0 903 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 TRPV1Q8NER1 839 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 RDM1Q8NG50 284 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 OR6J1Q8NGC5 347 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 GJA10Q969M2 543 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 AP5M1Q9H0R1 490 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 SPC25Q9HBM1 224 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-213ENST00000556929 SAMM50Q9Y512 469 aa10.95□□□□□ -0.66
TMEM260-213ENST00000556929 WDR64B1ANS9 1081 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 SORBS3O60504 671 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
TMEM260-213ENST00000556929 CCND3P30281 292 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-213ENST00000556929 TXLNAP40222 546 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 UBA7P41226 1012 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 ATN1P54259 1190 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-213ENST00000556929 EPHA7Q15375 998 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 IL17AQ16552 155 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 HAUS3Q68CZ6 603 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 MIS18BP1Q6P0N0 1132 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 TMEM87AQ8NBN3 555 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 SEPT1Q8WYJ6 367 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 COPS5Q92905 334 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 SPATA33Q96N06 139 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 CSRNP2Q9H175 543 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 UNC45AQ9H3U1 944 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 FAM13BQ9NYF5 915 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 VAV3Q9UKW4 847 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
TMEM260-213ENST00000556929 PCDHA10Q9Y5I2 948 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 PCNTO95613 3336 aa10.94□□□□□ -0.66
TMEM260-213ENST00000556929 CEP350Q5VT06 3117 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 POTEMA6NI47 508 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 DYNC1LI2O43237 492 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-213ENST00000556929 SLC26A4O43511 780 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
TMEM260-213ENST00000556929 PSAPP07602 524 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 PTMSP20962 102 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 TIE1P35590 1138 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 CPT1AP50416 773 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 ACTR2P61160 394 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 SP4Q02446 784 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 ARHGAP1Q07960 439 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 TMEM63BQ5T3F8 832 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 B3GNT9Q6UX72 402 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 TLK2Q86UE8 772 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-213ENST00000556929 NEK9Q8TD19 979 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 CALML4Q96GE6 196 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 CDK5RAP3Q96JB5 506 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 CLIC6Q96NY7 704 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.93□□□□□ -0.66
TMEM260-213ENST00000556929 DISC1Q9NRI5 854 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 CCDC39Q9UFE4 941 aa10.93□□□□□ -0.66
TMEM260-213ENST00000556929 DDX20Q9UHI6 824 aaKnown RBP10.93□□□□□ -0.66
TMEM260-213ENST00000556929 KDM3AQ9Y4C1 1321 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 A0A1W2PQ27 194 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 A0A1W2PQ64 194 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 A0A1W2PQD8 194 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 ADCY6O43306 1168 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 ATG7O95352 703 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 CCNE2O96020 404 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 MUTP22033 750 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 TCF7P36402 384 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-213ENST00000556929 GJA9P57773 515 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 GRIN1Q05586 938 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 HSDL1Q3SXM5 330 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-213ENST00000556929 GJC2Q5T442 439 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-213ENST00000556929 FAM160B1Q5W0V3 765 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 ABHD15Q6UXT9 468 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 CABP7Q86V35 215 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 RASSF8Q8NHQ8 419 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 SNX29Q8TEQ0 813 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 GPR20Q99678 358 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms