RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CYFIP1Q7L576 1253 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 SAMD3Q8N6K7 520 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 LMBR1Q8WVP7 490 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 PIGSQ96S52 555 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 GPR20Q99678 358 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 C11orf84Q9BUA3 381 aaPredicted RBP10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 UPF3BQ9BZI7 483 aaKnown RBP10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 KRT23Q9C075 422 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 KCNH6Q9H252 994 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 DIAPH3Q9NSV4 1193 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 MAD2L2Q9UI95 211 aa10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 SUPT16HQ9Y5B9 1047 aaKnown RBP10.46□□□□□ -0.73
HNRNPC-227ENST00000556897 RALGAPA2Q2PPJ7 1873 aa10.46□□□□□ -0.74
HNRNPC-227ENST00000556897 ZDBF2Q9HCK1 2354 aa10.46□□□□□ -0.74
HNRNPC-227ENST00000556897 ATG2AQ2TAZ0 1938 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 ADGRA3Q8IWK6 1321 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 PALM3A6NDB9 673 aaPredicted RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 SPATA31C2B4DYI2 1134 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 MBTPS2O43462 519 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 TBX10O75333 385 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 RB1P06400 928 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 GHRP10912 638 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 ICAM3P32942 547 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 ADAM17P78536 824 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 MRPS9P82933 396 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 SP4Q02446 784 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 SEMA3FQ13275 785 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 NEDD9Q14511 834 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 SEC23AQ15436 765 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 MFSD14AQ96MC6 490 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 INPP4AQ96PE3 977 aaPredicted RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 POP1Q99575 1024 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 DSCC1Q9BVC3 393 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 IGFLR1Q9H665 355 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 CNNM2Q9H8M5 875 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 RC3H2Q9HBD1 1191 aaKnown RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 ZNF215Q9UL58 517 aaPredicted RBP10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 RWDD3Q9Y3V2 267 aa10.45□□□□□ -0.74
HNRNPC-227ENST00000556897 LINC01565O15544 149 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 FIBPO43427 364 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 CYTH3O43739 400 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 CAMK1Q14012 370 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 BTG3Q14201 252 aaPredicted RBP10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 LPIN1Q14693 890 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 RUFY4Q6ZNE9 571 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 CYB5R4Q7L1T6 521 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 CLP1Q92989 425 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 LMAN2LQ9H0V9 348 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 RIOX1Q9H6W3 641 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 EHMT1Q9H9B1 1298 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 ALG13Q9NP73 1137 aaKnown RBP10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 DOCK5Q9H7D0 1870 aa10.44□□□□□ -0.74
HNRNPC-227ENST00000556897 TTC3P53804 2025 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 KAT6AQ92794 2004 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 NRCAMQ92823 1304 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 PNMA6FA0A0J9YX94 578 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 STXBP3O00186 592 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 ENPP3O14638 875 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 STAM2O75886 525 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 MMP1P03956 469 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 RRP1P56182 461 aaKnown RBP10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 TRAF1Q13077 416 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 GRM4Q14833 912 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 TAF2Q6P1X5 1199 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 PHOX2BQ99453 314 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 CD207Q9UJ71 328 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 PLAGL2Q9UPG8 496 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 CACNA1HO95180 2353 aa10.43□□□□□ -0.74
HNRNPC-227ENST00000556897 DGKIO75912 1065 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 DNAJB1P25685 340 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 MARK3P27448 753 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 TCF7P36402 384 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 NDUFV1P49821 464 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 MGAT3Q09327 533 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 PPFIA1Q13136 1202 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 ADAM15Q13444 863 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 IER5LQ5T953 404 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 EDAQ92838 391 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 ZNF689Q96CS4 500 aaPredicted RBP10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 SENP7Q9BQF6 1050 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 PLVAPQ9BX97 442 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 IL25Q9H293 177 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 OSBPL3Q9H4L5 887 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 SENP2Q9HC62 589 aa10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 MRPL42Q9Y6G3 142 aaKnown RBP10.42□□□□□ -0.74
HNRNPC-227ENST00000556897 USP34Q70CQ2 3546 aa10.41□□□□□ -0.74
HNRNPC-227ENST00000556897 HIP1O00291 1037 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms