RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, human

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-222	ENST00000556700	ARHGEF16	Q5VV41	709 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	VSIG10L	Q86VR7	867 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	FBXO11	Q86XK2	927 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	MCF2L2	Q86YR7	1114 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	KCNB2	Q92953	911 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	JAKMIP1	Q96N16	626 aa	Known RBP	13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	PHOX2B	Q99453	314 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	RNPEP	Q9H4A4	650 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	NSUN3	Q9H649	340 aa	Known RBP	13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	JMJD4	Q9H9V9	463 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	MRVI1	Q9Y6F6	885 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	ATG2A	Q2TAZ0	1938 aa		13.23	□□□□□ -0.29
NUMB-222	ENST00000556700	PALM3	A6NDB9	673 aa	Predicted RBP	13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	SORBS3	O60504	671 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	TROAP	Q12815	778 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	TIGD5	Q53EQ6	642 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	SGMS1	Q86VZ5	419 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	PDCD2L	Q9BRP1	358 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	AMN	Q9BXJ7	453 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	MAD2L2	Q9UI95	211 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	MRPL11	Q9Y3B7	192 aa	Known RBP	13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	SNX14	Q9Y5W7	946 aa		13.22	□□□□□ -0.29
NUMB-222	ENST00000556700	COL4A6	Q14031	1691 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	NLRC5	Q86WI3	1866 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	C5orf67	F2Z3F1	127 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	PPP1R11	O60927	126 aa	Predicted RBP	13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	UPP2	O95045	317 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	GGPS1	O95749	300 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	ADAM17	P78536	824 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	HYAL1	Q12794	435 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	SMAD2	Q15796	467 aa	Known RBP	13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	RPAIN	Q86UA6	219 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	RASEF	Q8IZ41	740 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	STAG2	Q8N3U4	1231 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	IL31RA	Q8NI17	732 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	ATP6V0A1	Q93050	837 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	MTMR8	Q96EF0	704 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	ZFP91	Q96JP5	570 aa	Predicted RBP	13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	SPATA33	Q96N06	139 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	YME1L1	Q96TA2	773 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	VAT1L	Q9HCJ6	419 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	RBM28	Q9NW13	759 aa	Known RBP	13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	CLDND1	Q9NY35	253 aa		13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	SEC63	Q9UGP8	760 aa	Known RBP	13.21	□□□□□ -0.29
NUMB-222	ENST00000556700	MYH6	P13533	1939 aa		13.21	□□□□□ -0.3
NUMB-222	ENST00000556700	C17orf102	A2RUQ5	167 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700		H3BRB1	525 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	ZBTB5	O15062	677 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	GRM6	O15303	877 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	MBTPS2	O43462	519 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	CFB	P00751	764 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	SMIM10L2A	P0DMW4	78 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	SMIM10L2B	P0DMW5	78 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	TGFB3	P10600	412 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	SMARCA1	P28370	1054 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	1e-7	■■■■■ 28.8
NUMB-222	ENST00000556700	RCAN1	P53805	252 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	CAMK1	Q14012	370 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	ADCK5	Q3MIX3	580 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	FAM26D	Q5JW98	314 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	IER5L	Q5T953	404 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	MICU3	Q86XE3	530 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	HOMER1	Q86YM7	354 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	SEPT8	Q92599	483 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	RRP36	Q96EU6	259 aa	Known RBP	13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	USP26	Q9BXU7	913 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	LRRC2	Q9BYS8	371 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	TUT1	Q9H6E5	874 aa	Known RBP	13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	RC3H2	Q9HBD1	1191 aa	Known RBP	13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	SENP2	Q9HC62	589 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	MUTYH	Q9UIF7	546 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	TELO2	Q9Y4R8	837 aa		13.2	□□□□□ -0.3
NUMB-222	ENST00000556700	ZBTB43	O43298	467 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	NCK2	O43639	380 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	RB1	P06400	928 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	MYCL	P12524	364 aa	Predicted RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	UBA1	P22314	1058 aa	Known RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	RPS6KB1	P23443	525 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	BMPR1A	P36894	532 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	EXOSC10	Q01780	885 aa	Known RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	PGM5	Q15124	567 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	SLC35G1	Q2M3R5	365 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	KCNV1	Q6PIU1	500 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	EP400NL	Q6ZTU2	488 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	BMP8A	Q7Z5Y6	402 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	RNF135	Q8IUD6	432 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	SAMD3	Q8N6K7	520 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	PRSS33	Q8NF86	280 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	EDA	Q92838	391 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	SNX27	Q96L92	541 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	MYL10	Q9BUA6	226 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	SPZ1	Q9BXG8	430 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	UPF3B	Q9BZI7	483 aa	Known RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	RIOX1	Q9H6W3	641 aa		13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	ALG13	Q9NP73	1137 aa	Known RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	MAP3K20	Q9NYL2	800 aa	Known RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.19	□□□□□ -0.3
NUMB-222	ENST00000556700	FAM50B	Q9Y247	325 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms