RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 DBF4BQ8NFT6 615 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 THEGQ9P2T0 379 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 MTUS1Q9ULD2 1270 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 CDH23Q9H251 3354 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 MICAL3Q7RTP6 2002 aa12.1□□□□□ -0.47
SPTLC2-205ENST00000556607 MYO9BQ13459 2157 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 CCDC196A0A1B0GTZ2 297 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 MAFGO15525 162 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 NEFLP07196 543 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 KCNA2P16389 499 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 CDC27P30260 824 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 IGBP1P78318 339 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 TAP1Q03518 808 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 SEPT8Q92599 483 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 BRF1Q92994 677 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 MXRA8Q9BRK3 442 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 AZI2Q9H6S1 392 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 RIC8AQ9NPQ8 531 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
SPTLC2-205ENST00000556607 UNC80Q8N2C7 3258 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 COL4A4P53420 1690 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 GSTTP1A0A1W2PQM5 241 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 LCHNA4D1U4 455 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 hCG_1984214I3L0E3 225 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 STXBP3O00186 592 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 ARHGEF15O94989 841 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 UPP2O95045 317 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 REC8O95072 547 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 FOSP01100 380 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 AKAP17AQ02040 695 aaKnown RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 PPFIA1Q13136 1202 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 MBTPS1Q14703 1052 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 TYW1BQ6NUM6 668 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 ZNF713Q8N859 430 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 LMBR1Q8WVP7 490 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 ATXN2LQ8WWM7 1075 aaKnown RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 RAD9AQ99638 391 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 GLT8D2Q9H1C3 349 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 SMARCAD1Q9H4L7 1026 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 JPH1Q9HDC5 661 aaPredicted RBP12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 BARHL2Q9NY43 387 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 SLC9A2Q9UBY0 812 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 SNX14Q9Y5W7 946 aa12.08□□□□□ -0.48
SPTLC2-205ENST00000556607 SIP14410 1827 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 CAND2O75155 1236 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 GJB5O95377 273 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 ARP10275 920 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 PSMA5P28066 241 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 HSPA4P34932 840 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 MRPS5P82675 430 aaKnown RBP12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 GRIK4Q16099 956 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 PLEKHG4Q58EX7 1191 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 KRT40Q6A162 431 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 CYP2W1Q8TAV3 490 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 TNPO1Q92973 898 aaKnown RBP12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 TUBE1Q9UJT0 475 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 INSL6Q9Y581 213 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
SPTLC2-205ENST00000556607 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 SCG2P13521 617 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 HOXC8P31273 242 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 GRB10Q13322 594 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 AP3B2Q13367 1082 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 PFKFB3Q16875 520 aaPredicted RBP12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 RUFY4Q6ZNE9 571 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 SPRED2Q7Z698 418 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 GDPD5Q8WTR4 605 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 DNAJB3Q8WWF6 145 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 ASB2Q96Q27 587 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 UIMC1Q96RL1 719 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 TGS1Q96RS0 853 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 YME1L1Q96TA2 773 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 IFIH1Q9BYX4 1025 aaKnown RBP12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 C6orf50Q9HD87 102 aa12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
SPTLC2-205ENST00000556607 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 LINC01553A4QN01 128 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 M0QZ92 97 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 BACH1O14867 736 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 GHRP10912 638 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 STAT5BP51692 787 aa12.05□□□□□ -0.48
SPTLC2-205ENST00000556607 RCAN1P53805 252 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms